Gene Fjoh_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3307 
Symbol 
ID5093025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3950703 
End bp3951929 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content42% 
IMG OID644742734 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_001195642 
Protein GI146301051 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TAAAGTACAT TTTTATTCTT TCGAGTGCAT TATTTGCCTT TAGCTGCAAC 
AACGATGATA CTCCTGCAAA CGGAGGCGGA ACAGTAACAG ATCCTGTAGA AACTAATCCT
GCAAATACTC AATATAAACC TGCATTTAAC GGACAAACCA GAATTGCTGG TATGACGACT
GATACAGAAT TTAAAGCTGA TATTATTACA AGTGCACTAA CAAGTCCGTG GGGCGTTAAA
GCGCTTCCTG ACGGTCGTCT TTTGGTGACT CAAAAAACAA CAGGAACTTT ACGTATTGTA
ACAACTGCCG GAGTGGTAAG TGAACCAATT ACGGGTCTTC CGGCTGTAAA TCCTGCTAAT
CAGGGAGGTT TGTTAGGTTT ATGTCTTGAT CCGGATTTTG CATCGAACAG AATGATTTAC
TGGGTATTTT CTGAAGCTGT AACAGGTGGA AATATTTCAT CTGTAGCCAA AGGAAAACTG
GCTGCTAACG AAAAAACAAT CGAAAATGCA ACGGTTATTT ACCGCTCAAG CCCTGCAAAT
CCTAGTGATC TTCATTATGG CGGACGTATT CTTTTTGACC AGACAGGAAA TCTTATTGTT
AGTACTGGAG AACGTTCGGT TTTACAAACC CGACCTTTGG CGCAGTCGCT TACAGCAAGT
TTAGGTAAAG TTTTAAGAAT TACAAAAGAC GGACAGCCGG CTTCTGGAAA TCCAACTTTT
AGCGGTGCCG GAGCTTTACC TGAGCTGTAC ACATACGGAC ATAGAAATCC GCAGGGATTA
GCAATTCACC CGGTTACAAA AGAGATCTGG CAAAGTGAAC ACGGACCAAG AGGAGGTGAT
GAGTTGAACC GTTTAAAAGC AGGTTCTAAT TACGGATGGC CGACTATTAC TTATGGAATT
GAATACAGCG GTGATCCAAT TGGTGACGCT ATCCAGCAGA AAGAAGGAAT GGAACAGCCG
GTTTATTACT GGGATCCGGT TATTTCTCCA AGCGGTATGA CTTTTTACAC AGGAAATCGT
GTGCCGGAAT GGGAAAACAA CCTTTTCATT GGTTCTTTAA GTGGTCAGCA TATTGCAAGA
TTGGTAATTA AAGACAATAA AGTTGTGGGA GAAGAAAGAC TTCTGGCAGG CGAAGGCCAG
CGTTTTAGAG ATATAACGCA AGGAGGCGAT GGAGCTTTAT ATGCCGTAAC AGATCAGGGA
AGACTTTATA AAATAGATAA GAAATAA
 
Protein sequence
MKNLKYIFIL SSALFAFSCN NDDTPANGGG TVTDPVETNP ANTQYKPAFN GQTRIAGMTT 
DTEFKADIIT SALTSPWGVK ALPDGRLLVT QKTTGTLRIV TTAGVVSEPI TGLPAVNPAN
QGGLLGLCLD PDFASNRMIY WVFSEAVTGG NISSVAKGKL AANEKTIENA TVIYRSSPAN
PSDLHYGGRI LFDQTGNLIV STGERSVLQT RPLAQSLTAS LGKVLRITKD GQPASGNPTF
SGAGALPELY TYGHRNPQGL AIHPVTKEIW QSEHGPRGGD ELNRLKAGSN YGWPTITYGI
EYSGDPIGDA IQQKEGMEQP VYYWDPVISP SGMTFYTGNR VPEWENNLFI GSLSGQHIAR
LVIKDNKVVG EERLLAGEGQ RFRDITQGGD GALYAVTDQG RLYKIDKK