Gene Fjoh_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3279 
Symbol 
ID5092997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3918593 
End bp3919216 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content33% 
IMG OID644742706 
ProductNLP/P60 protein 
Protein accessionYP_001195614 
Protein GI146301023 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTTA TGATGCATTT ATTTACAGAA TGCTATGCTC AAAAATATAT TTCGCAGATT 
CCGTTTAAAT ATGATTATTC TTTAGAGCTG TTAAAGAAAC AGTCTCAAAT GAAAGAAACA
GGTTTAAAAA ACAAAACCGT TGTTAATGAC AATTCAGAGA ATTTGAGTGA CGAAGTTCTC
GCTCTAAAAG AAAAATACTC TATTATTCTG GCTGTAATGC CAAATAAAAT TACCAACTAC
AAATTATACT CTTACATAGA TCCTTGGCTG AATACGCCAT ATAAGGAGAA AAGCTTTTCT
AAAAAAGGAA TTGACTGTTC TTATTTTCTT CAGTCTCTGT ACAGTGATGT TTATAAAGTT
ACGCTTCCTA AAGACCCGGC TGGAATGTGG AAATCAAAAT CTATTCAAAT TTTTACCGGT
CGCAGTTTCC TTGCAGAAGG CGATCTGGTT TTCTTTAGAT ACGACAAAGA TCATCCCATA
TCAGATGTTG GTTTGTACCT GCATAATGAC CGAATTCTGG CTTGTACAGA CAAAGGTCTG
GCAATATATA ATTTTAATGA TGAATATTTT CAGTTACGAT ACATAGGCGC AGGACGAATT
AACGAAGATG GAAAGAAAAA GTAA
 
Protein sequence
MILMMHLFTE CYAQKYISQI PFKYDYSLEL LKKQSQMKET GLKNKTVVND NSENLSDEVL 
ALKEKYSIIL AVMPNKITNY KLYSYIDPWL NTPYKEKSFS KKGIDCSYFL QSLYSDVYKV
TLPKDPAGMW KSKSIQIFTG RSFLAEGDLV FFRYDKDHPI SDVGLYLHND RILACTDKGL
AIYNFNDEYF QLRYIGAGRI NEDGKKK