| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3274 |
|---|
| Symbol | |
|---|
| ID | 5092992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3912310 |
|---|
| End bp | 3915042 |
|---|
| Gene Length | 2733 bp |
|---|
| Protein Length | 910 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644742701 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001195609 |
|---|
| Protein GI | 146301018 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.14902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATT TTAAAATAAT TGGAAATCCG GATCCTGTTG TAGGTAAGGA AGAATTCTAC
TCAGTAAATA CTTTTTTACC GAGTATTCTG CCTTTTCAAA ATTCAGCTTC TAGTAATAGT
TTTGAACAGC CAGTAAAATG GGAAATATAT ATTCTCGAAA ATGGAAGATG GCGCAAGACT
AAAGAAAATG ATAAAACAGG AAAAAGAATC TCTTACACCT TTCTTCAAAA AAGTTTAGAA
AGAAAAGGAA TCCGCATTCT GGCAAGAAGA GGAGAAGATG TGGCACGTCT GAATGTAACG
ACACATCCCG CCGAAAAACC AAAAATTGAA AGCATAGAAC TGCTTGATAA AAACGGACAA
AAACCAGGAA AACCACTTTC ATACGGACAG ACTTTAAAAG CAAGGGTTCA CTGTCTTCAT
ATGGAAAAAC ACAAAGTATC TGTTACCTTA TGGGAAGATG ATGCTATTGG TGCCGGACAT
AACAAAGCAA ATGAAAATAA TCTAATACAA ACTCTTTCAG GAGTTGTTGC AAACGGTAAA
GCAGATGTTG ACTTTTTGCT GAGACCAAGT TTTGCTAAAA TTGCAAAACA AAATGGGCCG
GAAGAAGGTA AAATTCACGA ATACTATGTT ACTGTTGATT TTAACAAAGA TAAAATTGCA
AGTAACAACG TAAACGTAAA TGATCTTGAA GCTCCTGTAG CGCCTTTTAA AGGTAAAGTT
CCGGTACAGC AGCAAGCACC TGCTAAACCC AAAGCTTCTC TACCACAGCC GACACAGCCA
AAAACTAAAG CACCAGCCAC GGGATCTTCA TCAGCGCCAA AAGTTAAAGC AGAAATTACC
AGAGTACATA TTACAAACTC TGCTAAACAG CCTATAAAAG GAACTCACAA GGAAAAAGAA
ATTATCGTTT GGGTTGACTC ACAAGGTTTG ATTGGAAAAG AGATCCGTTT TAAATTATAT
GATGAAGATT ATTTAAGTAA TGATTTATTA GTTGATCAAA AATTTAAGAT TACTGGCGAT
ATATTTCCAA TTACTGTACA ACTAGACAGG ATATTAAGAA GCAAAGGAGG GATTTCTGGA
GAAGGTGCAG AGCAGGAATT GTTTGCTGAT GTTGAAGTTA TACAAACTAG TATACATAGC
AAAAGTGAAG TAGTTGATGT AGATGCTAAA GTTTTTAAAC CAGATCCTGT TGATTCAACT
AATAAGGTTG CGAAGATTGG AGAAGGGGAT AAGAGCAGTA TTAAAGGTAA AGGAGAGTGT
TATTGCGGTA AAGATTTTGA AGAAAAAGAT GTTAAAAAGT TAGTAAAACT TTTAAAAGGA
TCAGAAATTA TCTGGGAAGG AGCTTATTTA GGAAAAAAAC ATATAGATTG TAATATTAGC
GATAAAACGT TTGTTACTCT GACAAAGTCA TTAAATAGTG CTTTTAAAAA ATATAGCATA
TACTCCTGTA TTCAGAAAAT ACATTTTCTT GCTCAAGTTT GTGAAGAAAC AGGAACTTTT
GCTTTGTCTG AAGAAACAGA AGGTCAGCAT GACTCTAGTA AAAGCATATA CAAAGGTCGA
GGAATATTAC AACTTACAGG AGTTAAAAAA AAGGGAGAAA AATTATATAA TGGAGAAGGA
CCTTATAAGG ATTATGCTGA TTATATAGGA GATCCAGATA TTGTTAAGAA ACCAGAAGTT
GTAGCTAATA ATGTGAATTA TTGTATTGAT AGTGGTGCAT GGATATGGAG TGTAAATAAG
AGAATGCCCT CAGATAGAAA TTCAGAAGCA GTGAAAAGAT GGGCAAGAGA AACAGCAGGA
AAATCACTCA ATGAGTTAGC GGTTTTTGGT GATAAATATT TAGAATTGAT TTCTGTTTTA
CTTAATGGAA GAAATAAAGA TAAAGGAAAT ATGCCTAATG GATGGGAAAA TAGAAAGAGT
ATGTATACTA AACTAAAAAC AGTCTTCTTT CAATATCATC TTTATCATAA AGATGACTCT
AAACCAGTAT TGCCACAGGG TATTATTACA TATAACATAT ATTCTGACGG AAGGATAGAA
AGAAATACTC CAAAACAAAT CGAGTCTGGT TTTGAAAAGA AATATAAGTA TGTTTATCAT
GATAAAAAGA ATAAAGAACA TGAAATATGT ATTGTTGATT TTGTAACTGC TCAAAATTGG
GTTGTTGGTT CAAAAGAAGA TGGAGGTAAA GGCTGGGAGA AAAGAACTGC AGGAGGAAAA
ACGCGTTACT ATCAAAAAGG TAATGGACAG GTTGAGCTAG TAAAAGTAAA CCTGCCAATA
TATCATAGTG AAGGTGATGT ATTAATTGAT GTTGGTGATA ACACAGATAG GGAATATTTA
AATCCACGTG CTTTTGCATC CATGCTGGGA GCTTTAGCTG AATGTGGTTA TTCGGATTTT
AATTTTAATG GCTCTACTTC CCTAGATGGA ACAGGAGCAC CAAGTGTAAC CCATGTAAAT
GGAGTCTCTT TTGACTTTAG ATATTTAAGA AAAGATAAGA CGGGTAATAA CCTATATATT
AATACAGATC CTAATTCTTT GGATGTAGAG AGACAAGAAA AATTTATCGA TGCTCTTATA
AAATTTGGTT ACTCTCAGTT CTATAGTTTT AACATTAAAA TTAAAAATCA AAATTTTATA
CTTAAAAATT CAACTCATTT AGCTGATCAT CACCACCATT TGCACATTCG AAGAGAGGGA
TATAAACCAA ATTTTAAAGA AACAAAAGAA TAG
|
|---|
| Protein sequence | MSDFKIIGNP DPVVGKEEFY SVNTFLPSIL PFQNSASSNS FEQPVKWEIY ILENGRWRKT
KENDKTGKRI SYTFLQKSLE RKGIRILARR GEDVARLNVT THPAEKPKIE SIELLDKNGQ
KPGKPLSYGQ TLKARVHCLH MEKHKVSVTL WEDDAIGAGH NKANENNLIQ TLSGVVANGK
ADVDFLLRPS FAKIAKQNGP EEGKIHEYYV TVDFNKDKIA SNNVNVNDLE APVAPFKGKV
PVQQQAPAKP KASLPQPTQP KTKAPATGSS SAPKVKAEIT RVHITNSAKQ PIKGTHKEKE
IIVWVDSQGL IGKEIRFKLY DEDYLSNDLL VDQKFKITGD IFPITVQLDR ILRSKGGISG
EGAEQELFAD VEVIQTSIHS KSEVVDVDAK VFKPDPVDST NKVAKIGEGD KSSIKGKGEC
YCGKDFEEKD VKKLVKLLKG SEIIWEGAYL GKKHIDCNIS DKTFVTLTKS LNSAFKKYSI
YSCIQKIHFL AQVCEETGTF ALSEETEGQH DSSKSIYKGR GILQLTGVKK KGEKLYNGEG
PYKDYADYIG DPDIVKKPEV VANNVNYCID SGAWIWSVNK RMPSDRNSEA VKRWARETAG
KSLNELAVFG DKYLELISVL LNGRNKDKGN MPNGWENRKS MYTKLKTVFF QYHLYHKDDS
KPVLPQGIIT YNIYSDGRIE RNTPKQIESG FEKKYKYVYH DKKNKEHEIC IVDFVTAQNW
VVGSKEDGGK GWEKRTAGGK TRYYQKGNGQ VELVKVNLPI YHSEGDVLID VGDNTDREYL
NPRAFASMLG ALAECGYSDF NFNGSTSLDG TGAPSVTHVN GVSFDFRYLR KDKTGNNLYI
NTDPNSLDVE RQEKFIDALI KFGYSQFYSF NIKIKNQNFI LKNSTHLADH HHHLHIRREG
YKPNFKETKE
|
|---|
| |