| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3260 |
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| Symbol | |
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| ID | 5093421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3899844 |
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| End bp | 3901652 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644742687 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001195595 |
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| Protein GI | 146301004 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V
[TIGR01646] Rhs element Vgr protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.386521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATT TTTCAGAACA AGTACATATA ACTATAGGAA GTTTTACCCA AAACGTTGTT
TATTATGATT TAAAGCTATC TCAAAAAATG GCCGATCATC ATCATTTTTC TTTTGTTTGG
CAATATACAG GTAAAGCCGT AATTAACCCG GCAGATCAGG CTAAGGCTCT TAGAAGCTAT
CTTGGAGACG AAGTAATTTT TACTTTTAAA AGTCTTACTG GGATCAGATT AATGAGCAAA
GGTATAATTA CTGAACTTTC ATCGATTGAT GTTGATGGAA GTCCGGCAGG ATTACACGTT
TCTGGTGTAA GTCACAGTAT TGTTATTGAT GATATGAAAA AATCAAGAAC ATTTAAAGAC
CGCAGTATGG ATGATATCGT ATTGGGGATT TTTGCTGAAG GACCGGGAGA ATTTTATCAA
AGAGATTCTA TTAAATCGAC TTATCTTAAA GAATTTAAAA ATCTTTTACA ATATAACGAA
ACTAGTTTTG AATTTTTAAA AAGAATAGCA GCACGTTATG GACAATGGTT TTATTTTGAC
GGAATGCGTA TGCAGTTCGG ACAGACAAAA AGCAGCCAGA CCAAGCTTAT AAATGGAGCT
TCATTACACA GCTTTAAGAT ACAAGCTAAT ATGGCTTCAC ATAAAATTTC GCTGAACGGT
TATGATTATA AAAATGTAGC AACTTTTCGT GAGTCAGCAC CTAAGACTTC ATCTGGAAGT
AAAGACAGCT TTGCCGCTAT TGTAGGTTAT AATCAAGGAA CTGTAGCAAA TTCTGATTTA
AATAATGGGG CTTATACCGC AAATGCCACA AACAAAGACG AACTTGATGA AATGATAAAA
CTGCAGACTG CGGGCAGTGA TGCCAACAGT GTTTATTACA GCGGTATTTC TTATTTTCCA
ATTGGTCTTG GACAGGTATT TACAATAGTA AACCAAACAG TAGCACATGA ATTAATTGCT
ATTGAAGTTG TACATCATTC TCAGGTGCAT GGAAATTATT CTTGTGAGTT TAAAGCAATT
CCTGCAGATG TGTCAGCACC ACACTATACA AATGTATTTG TTTATGGCAA AGCCGAAACA
CAGCCTGCAC AAGTAAAAGA TAATAATGAT CCTGAAGGAT TAGGACGTGT AAGAGTAGAA
TTTTATGGTG CAAGCGGTAC AGCAGTTACA GATTGGATAA GAATGGTGCA GCCTTATTCT
GGTTCAGGAA AAGGATTTTA TTTTGTTCCT GAAATCGGAG AAGAAGTTTT AATTGGTTTT
GAAGGCAATA ACGTCCAGAA TCCTTATGTA ATTGGTGCGC AGTATAACGG ACAAGATTCA
AGTGGTTATG CAGATGCACA GAATAACATT AAAGCGATTC ATACGAGAAG CGGTCATGTA
ATAAAATTCA CAGAAGATGA GAGCATCTTA ATTGCTGATA AGAACGGTAA TGAGATACTA
TTGGATACTG TTGGAGGTAA CATAACTATT ACAGCAAACA ACACCATTGA TCTAAACGCA
CAAAACATCA ATCTTAATGC TTCTCAAAAT ATTACTGCTA ATGCAGGAAT GAATATTACA
GAAAGTGCCG GAGCCGACAA AATGAGTATT GTAGGTATGA TGCTTAATAC TACTGTAGGA
GGTGATCATA TGCTTAATGT TACAGGAAAC TTCATGGAAA ACATTGAAGG AAATCTTGAA
TCTCATACGG CTAAAGAAAG ACAGGAAGTT GGAGTTAAAG GAATTGATAC AAGCAGTGAA
GGAGGGATAA ATAAACACTC TAAAAAAGAA ATGCAAATTA ACAGCGCCGA AAAATCTAAA
TCTTACTAA
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| Protein sequence | MAHFSEQVHI TIGSFTQNVV YYDLKLSQKM ADHHHFSFVW QYTGKAVINP ADQAKALRSY
LGDEVIFTFK SLTGIRLMSK GIITELSSID VDGSPAGLHV SGVSHSIVID DMKKSRTFKD
RSMDDIVLGI FAEGPGEFYQ RDSIKSTYLK EFKNLLQYNE TSFEFLKRIA ARYGQWFYFD
GMRMQFGQTK SSQTKLINGA SLHSFKIQAN MASHKISLNG YDYKNVATFR ESAPKTSSGS
KDSFAAIVGY NQGTVANSDL NNGAYTANAT NKDELDEMIK LQTAGSDANS VYYSGISYFP
IGLGQVFTIV NQTVAHELIA IEVVHHSQVH GNYSCEFKAI PADVSAPHYT NVFVYGKAET
QPAQVKDNND PEGLGRVRVE FYGASGTAVT DWIRMVQPYS GSGKGFYFVP EIGEEVLIGF
EGNNVQNPYV IGAQYNGQDS SGYADAQNNI KAIHTRSGHV IKFTEDESIL IADKNGNEIL
LDTVGGNITI TANNTIDLNA QNINLNASQN ITANAGMNIT ESAGADKMSI VGMMLNTTVG
GDHMLNVTGN FMENIEGNLE SHTAKERQEV GVKGIDTSSE GGINKHSKKE MQINSAEKSK
SY
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