| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3257 |
|---|
| Symbol | |
|---|
| ID | 5093418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3895944 |
|---|
| End bp | 3897596 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644742684 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001195592 |
|---|
| Protein GI | 146301001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.728074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAA TAAGATTAGT TAGAGGTACT ATAACAAAAA CTACCGGAGG TGATCACAAT
ATTTATTCTG AAGGTAATAT TGTATATAAT TCTGGTCAGG CTGTAACCGA GACGAGTGAC
ACAGGAATTA AGTACGGAGA TCCGAAAGAT ATCCCTCAAA GAAAAAATGA TGATTTTGAT
ATTACATTTG AATTAGATAA AAAAACAAAG TCAGTTGTTC CTTTGGGTAT TTTAGATTTT
AAGAATAATG CAGAAAATCC TTATTTCTGC TTTAAATTTG GTTTAAAGAA GACATCAATT
GATTCTTTAA ATTTTCAAAT AATAGGTGAA AATGATGAAA TTATTTATCA AATGACCTAC
TTACAAACGA TTATAGTAAA AGCTTCTGAA CTTCCTAAAA TCTTTTCAAA TATACCCAAA
TCAACACAAG AACCAATTTT ATCTAAAATT TGGGATTTTC AAAAAATTTA TAATGAATTT
GCATCTTCAC CAGGTGATTA CACTAAAGAA GGTGAATATG TTATTCATTG GGATGGTTTT
GATAATAATG ATGTTTATGA CAGCACCAAA TTCAATAATA AGAAGTTAAA GGCTAGAATT
ACGGCTACCA AAGGTGATAA GCAAAAAAGT TTGACAATAG ATTTTTCTAC TAATTATACT
CAAGTACAAT GGACTGACGT AAAAATTGAT AGAAGCAAGA AACGAATTGA TATAACCTTA
AGAGTAGATT TAAGGGATGG TGGTACAAAA GGTTTGAATT GTTATACTTA TAATTTACCT
GAGGAGTCAA GTTATGAAAC GTTTACCCCG ACTACAGGAA CTGATCCTCT TAAAGGGTAT
AAAACAACTA TTTGCGATTG GGATAAAATA CCGGCTTCGG AATTAAATCC TGCACAACCG
GTTTTAAAGA CTAGAACAAA ATCTTTTGAA GAATTAAAAA AACTTGCTTT TGAAGGTCTG
GAAAGATATT GGGGAAGAAA TAAAAATAAT ATTGTTGGTA ATAATGTAAA TATTATTGAT
TCTTATGAAG TATTTATAAA ACCAATTGAT ACTACTAAAA ATGCTCTAAA TTCTCTACCG
TTGGTGTATA ATACTAATGG AGGATGGATG CGGTCAGGTA ATCCTGGAGC AAGCTATGAT
GATGGTAATT TAGATGATGA TTTGTTAAAT GCTCTTCCAG ATTTAGGTGT AATACAAAGA
TTATCTTATA ATGCAGGATA TATTAAACAT GATTGGAAAA ATGATGCTCA CAACGGATGG
CGCTATCATA TTGAAAAAGA TTCAAATACG TATTATGATG AAGTTTCAAA TTTTAAAGAA
ACAGCTGCTC ATGAATTAGG ACATGAATTT TTACAAGCCT ATGCAGGAAC AGCATTCTCA
TGGCAGCACA AAGGAAGTTC ATATTATTTA CCTCAAGATA CTAAGCCTAT AAAGGGAGAT
GAAACCTTTT GGGGTAAAAT GACTCATATG GATGAAATGC CTGAAACTTC AGGAGAATAT
TATCCTAAGA ATGGTGAAAT AGACCTAATG AAATATTATA ATACTACTGA TAAAGCAGGG
AAATTTGTTG CAGGGGCTGA TTTAAAAAGA ACAATTGCTG CAGAAAAGGA CGTATTAGGT
CTGATATGGT TAACAAAACT TAAAATACAA TGA
|
|---|
| Protein sequence | MSRIRLVRGT ITKTTGGDHN IYSEGNIVYN SGQAVTETSD TGIKYGDPKD IPQRKNDDFD
ITFELDKKTK SVVPLGILDF KNNAENPYFC FKFGLKKTSI DSLNFQIIGE NDEIIYQMTY
LQTIIVKASE LPKIFSNIPK STQEPILSKI WDFQKIYNEF ASSPGDYTKE GEYVIHWDGF
DNNDVYDSTK FNNKKLKARI TATKGDKQKS LTIDFSTNYT QVQWTDVKID RSKKRIDITL
RVDLRDGGTK GLNCYTYNLP EESSYETFTP TTGTDPLKGY KTTICDWDKI PASELNPAQP
VLKTRTKSFE ELKKLAFEGL ERYWGRNKNN IVGNNVNIID SYEVFIKPID TTKNALNSLP
LVYNTNGGWM RSGNPGASYD DGNLDDDLLN ALPDLGVIQR LSYNAGYIKH DWKNDAHNGW
RYHIEKDSNT YYDEVSNFKE TAAHELGHEF LQAYAGTAFS WQHKGSSYYL PQDTKPIKGD
ETFWGKMTHM DEMPETSGEY YPKNGEIDLM KYYNTTDKAG KFVAGADLKR TIAAEKDVLG
LIWLTKLKIQ
|
|---|
| |