| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3239 |
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| Symbol | |
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| ID | 5093400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 3857888 |
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| End bp | 3861004 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644742666 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001195574 |
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| Protein GI | 146300983 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAA TGTTTATCAA AAGAAAAATA TTATCATTAA TCATCTCGGT TATGATAGTA
CTTTTAGGAT TACTGGCTTT GTTCCAGCTT CCTATTACAC AATTTCCAGA TATTGTGCCT
CCGTCTGTAA CGGTTACGGC AAAATATACC GGAGCCAATG CAGAGGTTTC TGCCAATGCC
GTAGCGCTTC CGTTAGAACG AGCTATAAAC GGTGTTCCGG GAATGACGTA TATGTCTACT
GTAACTTCAA ATGACGGTTT AACGCTGATT CAGGTTTTCT TTGAAGTAGG AACCGATCCT
GATTTGGCAG CCGTAAACGT TCAAAACCGT GTGACAACAA TACTTGACGA ACTTCCCGAA
GAAGTTATTC GTGCCGGAGT TACCACAGAA AAAGAGGTAA ACAGTATGCT GATGTACCTG
AATATTACTA GTACAGATAA AACTCAGGAT GAACAGTTTA TCTTCAATTT TACGGATATT
AATATTCTTC AGGAATTAAA ACGTATTGAT GGTGTCGGCC GTGCTGAAAT TATGGGTCAG
AAAGAATATT CGATGCGTGT CTGGCTGGAT CCGCAAAAAA TGCTTTCTTA TAATATATCG
GCAAATGAAG TCATCAATTC TCTTCAAAAG CAAAACATTT CTGCCGCTCC GGGTAAAGTA
GGTGAAGGAT CCGGACAGCT TGACAATCAG TTACAATATG TAATAAAGTA CGGCGGAAAA
TTCTTTGAAC CAAAACAGTA TGAAGAAATT CCGCTGAGAG CCAATCCAGA CGGAACGATT
CTGCGTTTAA AAGATATTTC GAACATTGAA TTTGGTTCGA TGAGTTACGG AATGGTTTCT
AAAACCGATG GAAAACCTTC GGCATCTATT ATGTTGAAAC AGCGTCCAGG TTCGAATGCA
TCTGAAGTTA TTGCCAGTGT AAAAGAAAAA ATGGCAGAAC TAAAAGGAAC TTCTTTTCCT
CCGGGAATGG ATTACAACAT TGCGTATGAC GTTTCGCGTT TTCTTGACGC TTCTATCGAC
GAGGTTTTAA GAACACTGAT TGAAGCTTTT ATTCTGGTTG CATTTGTGGT TTTTATCTTC
CTGCAAGACT GGCGTTCGAC CTTAATTCCG GTTTTAGCCG TTCCTGTTGC CTTAATTGGT
TCGTTTACGT TTATGTCGAT GATGGGATTC TCGATCAACC TGTTAACGCT TTTTGCTTTG
GTTCTTTCTA TCGGAATTGT TGTTGATAAC GCGATTGTCG TCGTCGAGGC CGTTCACGTA
AAAATTTCCG AAGAACATAT GGAACCTTTG CCTGCCACAA TCAGCGCGAT GAAAGAAATT
ACCGGAGCTG TAATTGCCAT TACCATTGTT ATGGCGGCTG TATTTATTCC CGTTGCCTTT
TTGAGCGGTC CGGTTGGGGT TTTCTACAGG CAGTTCTCGT TAACGATGGC AATTAGTATT
GTGATTTCGG GAATCAATGC CCTTACGCTT ACTCCTGCTT TGTGTGCTAT TATGCTGAAA
GCGCATGATC CAAGCAAAGA AAAAAAATCT TTACTGGATA AATTTTTCCA CCGATTCAAT
AAATGGTTTG ATAATGTAAC GTCTAAATAC ATTAAAGTAT TAGTAAAATT TGCCGATCGT
ACTTCGATTA CGGTTGGATT ATTGGTTTTA TTCTGCTTAT TTACCTGGGG AACAAGCAAG
TTTCTGCCTT CAGGATTTAT TCCGTCTGAA GATCAGGGAA TGGTCTATGT AAACGTAACT
ACACCTCAGG GAGCAACGGT AGAACGTACC GAAAAAGCAT TAGACGAAGT AACACGTCTT
GCTAAAGAAA TTAATGGTGT TGACAACGTA ACGACACTTG CGGGATACAG TATTGTAACT
GAAATTGCCG GCGCTTCTTA CGGAATGGGA ATGATCAACT TGAAGGATTG GAAAGAACGT
GATATTTCGG TAAACGAATT TATCGCCAAA CTAACCGAAA AAACAAGAGG CATTACAGAT
GCGCAAATTG AAATTTTTGC ACCGCCAACA GTTCCCGGAT TTGGTAATAC GAGTGGTTTT
GAACTTCGTT TACTCGATAA ATCCGGCGGA ACTATTAATA ATACCGATGA AGTAACTAAA
AACTTTATTA AAGAACTTAA TGCTTCACCC GAAATACAAA ACTCCTTTAC CAGTTTTGAT
GCAACTTTTC CGCAGTATTT AATTCATATT GATTATGATC TTGCGGCAAA AAAAGGAATT
TCTGTAGACA ATGCTATGGC AACTTTACAA ACCATGTTAG GTTCGTTTTA TGCAACCAAC
TTTATTCGTT TTTCTCAAAT GTATAAAGTA ATGGTTCAGG CAAGTCCGCA GTTTAGAAAA
AATCCCGAAA GTATTCTGGA TATGTATTTA AAAAATGATG CAGGCGAAAT GGTTCCGTTT
TCAACTTTTA TCAAATTAGA ACGTGTTTAT GGTCCAGAAG TTTTAACACG ATACAATATG
TATATGTCGG CTATGATTAA CGGAGAACCG GCAGAAGGCT ACAGTTCTGG AGAAGCTATT
GCTGCTGTTG AAAGAATAGC CGAAGAAAAA CTCCCTAGCC GATTTGAACT GGAATGGTCG
GGAATGACGC GTGAAGAAAT TCTCTCCGGA AATCAGACTA TTTACATTTT CGCTCTTTGT
ATTCTGTTTG TGTATTTACT GCTTGCGGCA CAGTACGAGA GTTTACTGCT TCCGTTTCCG
GTATTATTGA GTCTGCCTGT TGGAGTTTTT GGTTCTTATC TTGCTCTTTT AATGGTTGGT
TTAGACAACA ATATTTACGC ACAGGTAGCA CTCGTCATGC TGATTGGTCT GCTCGCCAAA
AATGCCATTT TGATTGTGGA GTTTGCGATG GCACAAAACA AGTTAGGACG AGACATTACC
GAAGCAGCGA TTGAAGGTGC GAGACTTCGT TTCAGACCTA TTCTTATGAC ATCTTTTGCT
TTTATTTCAG GATTGATTCC GTTGTGTATT GCCACCGGAG CCGGAGCAGT TGGAAACCGT
TCAATTGGTA CTGCAGCAGC TGGAGGAATG CTTATAGGAA CTGTTTTCGG ACTTGTAATC
ATTCCGGGAC TTTATATCCT GTTTGCCAAA TTAGAAAAAG CAATGAATAA AAATTAA
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| Protein sequence | MIEMFIKRKI LSLIISVMIV LLGLLALFQL PITQFPDIVP PSVTVTAKYT GANAEVSANA
VALPLERAIN GVPGMTYMST VTSNDGLTLI QVFFEVGTDP DLAAVNVQNR VTTILDELPE
EVIRAGVTTE KEVNSMLMYL NITSTDKTQD EQFIFNFTDI NILQELKRID GVGRAEIMGQ
KEYSMRVWLD PQKMLSYNIS ANEVINSLQK QNISAAPGKV GEGSGQLDNQ LQYVIKYGGK
FFEPKQYEEI PLRANPDGTI LRLKDISNIE FGSMSYGMVS KTDGKPSASI MLKQRPGSNA
SEVIASVKEK MAELKGTSFP PGMDYNIAYD VSRFLDASID EVLRTLIEAF ILVAFVVFIF
LQDWRSTLIP VLAVPVALIG SFTFMSMMGF SINLLTLFAL VLSIGIVVDN AIVVVEAVHV
KISEEHMEPL PATISAMKEI TGAVIAITIV MAAVFIPVAF LSGPVGVFYR QFSLTMAISI
VISGINALTL TPALCAIMLK AHDPSKEKKS LLDKFFHRFN KWFDNVTSKY IKVLVKFADR
TSITVGLLVL FCLFTWGTSK FLPSGFIPSE DQGMVYVNVT TPQGATVERT EKALDEVTRL
AKEINGVDNV TTLAGYSIVT EIAGASYGMG MINLKDWKER DISVNEFIAK LTEKTRGITD
AQIEIFAPPT VPGFGNTSGF ELRLLDKSGG TINNTDEVTK NFIKELNASP EIQNSFTSFD
ATFPQYLIHI DYDLAAKKGI SVDNAMATLQ TMLGSFYATN FIRFSQMYKV MVQASPQFRK
NPESILDMYL KNDAGEMVPF STFIKLERVY GPEVLTRYNM YMSAMINGEP AEGYSSGEAI
AAVERIAEEK LPSRFELEWS GMTREEILSG NQTIYIFALC ILFVYLLLAA QYESLLLPFP
VLLSLPVGVF GSYLALLMVG LDNNIYAQVA LVMLIGLLAK NAILIVEFAM AQNKLGRDIT
EAAIEGARLR FRPILMTSFA FISGLIPLCI ATGAGAVGNR SIGTAAAGGM LIGTVFGLVI
IPGLYILFAK LEKAMNKN
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