| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3238 |
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| Symbol | |
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| ID | 5093399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 3856755 |
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| End bp | 3857861 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644742665 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001195573 |
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| Protein GI | 146300982 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA AAAACAATTC ATTTTTCATC TCTATTTTAT CACTGTTCGT TCTGGTCTCG
TGCGGTGATA AAGCCAAAAA AAATTCAGAT AAAATCAAAA CACTGCCCGT TTATAAGGTG
ACTTTGAGAG ATACCGTGGT TTCTAACCGA TTTGTTGCCG ATGTTCACGC CAAAAACAAT
GTCGAAATTC ACGCTCGTAT TCCCGGATTA CTCGATAAAG TATATGTAAG CGAAGGACAA
AAAGTAAAAA AAGGACAAGT CCTGTTTAAA ATAAGCGATG TAGAACTCCA AATACAACTT
TTAAAAGCCG AAGCTGTTTA TAAAAGCAGT ATGGCCGATT TAAGAATCGC AACCGTTGAA
CTGGAACAAG CCCAGACCCT TTTTAATAAA AAAGTAATTG CCGATAAGGA ATTAGAATTA
TCTAAAGCAA AACACGATGC AGCTTCTGCT AAAGTGGCTC ACGCATCTGC AGAAAGAAAA
GCGATCAATC AGCAGATTAG TTTTACCACA ATCCGCGCTC CATTTGACGG AACGGTTGAC
CGAATTCCGT TTAAAGAAGG AAGTCTGGTA GAAAACGGTT CTCTTTTAAC CAACGTGTCA
CAGCTTGATT ATATTTACGC TTATTTCTCA ATTCCTGAAA ATATTTATTT CCAGATGATG
ACAGATAAAA GCCTGAATAC TCATGAAGAT ATTCAACTGG TTTTGCCAAA CGGAATTGTC
TATAACCAAA AAGGAGAACT TAGAACTGCC GACGGAGATA TCGACCGACA AACTGGTTCT
ATTCAATATA AAGCAAAATT TGAAAATCCG CAGGGATTTA TCAAACACGG AACATCTGGA
AAACTTATTA TTTCAGAACC CAAAACCAAT GCGATCATAA TTCCGCAAAA AGCAGTTTTT
TCTATTCAGG ACAAACAATT CGTATTTCTG GTAAATAAGG AAGGCAAAGT AAAAATGACC
AACGTTACTA TTGGAAGTAC TCTTGATGAT GTATACATTC TAAACAAAGG TTTAAAAAAC
AACGATTTAA TTGTTCAGGA AGGCATTCAG TCTTTACGCG ACGGCGATAA AATCAATATT
AAAGAAACCC AGAACGTAAG CCTGTAA
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| Protein sequence | MSIKNNSFFI SILSLFVLVS CGDKAKKNSD KIKTLPVYKV TLRDTVVSNR FVADVHAKNN
VEIHARIPGL LDKVYVSEGQ KVKKGQVLFK ISDVELQIQL LKAEAVYKSS MADLRIATVE
LEQAQTLFNK KVIADKELEL SKAKHDAASA KVAHASAERK AINQQISFTT IRAPFDGTVD
RIPFKEGSLV ENGSLLTNVS QLDYIYAYFS IPENIYFQMM TDKSLNTHED IQLVLPNGIV
YNQKGELRTA DGDIDRQTGS IQYKAKFENP QGFIKHGTSG KLIISEPKTN AIIIPQKAVF
SIQDKQFVFL VNKEGKVKMT NVTIGSTLDD VYILNKGLKN NDLIVQEGIQ SLRDGDKINI
KETQNVSL
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