| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3235 |
|---|
| Symbol | |
|---|
| ID | 5093397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3854600 |
|---|
| End bp | 3855301 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644742663 |
|---|
| Product | abortive infection protein |
|---|
| Protein accession | YP_001195571 |
|---|
| Protein GI | 146300980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAA AAATTAACTA CGGAGCAATT GCAGTTTTTT ACATCATCGC TGTTATATGC
AGATTTATAG CTGTTAAAAC AGATTTATTT AAGGGAGTTG AACATAATGA TTATATATTT
ATTTTAATTC GAGGTCTGGG GCCGGCTCTG GGAGCTTTTG CCGCAATAAA ATTATTCTCA
CTTCAAAATC CAATGTCTTT AAAAGGAATA TACAGCAATT ATATTCTGCC TTTTGTTGTT
TTTTGGCTGC TTCCTGCGCT TTCTATTACA ACCTTATATT ATTTTATATA CGGAAAGTTC
CCAATTGTAT TTGCTTTTAC CGTTTTAGTT TACGGACTTT TAGAAGAAAT TGGCTGGAGA
GGATTTTTGC AGGAACAATT AAAAGGGCTT CCAAAGTTTA CTTCAATTGC TATTATTGCT
ATTCTTTGGT TTGTATGGCA TTTAAACCTT AATATGACAA CTTCAAACCT AATTTTTCTT
GGGGTTATTT TCTTCGGAAC CTGGGGAATT GGTAAGATAT ATTCTAAAAC AGGTTCACTT
CTTGCCGTTG CGGGAGTTCA TTCGCTGAAC AATTTCTTTG TAAAAGAAGG AGTTCACGAA
CAAGAATTAA TGGTAATTCT GGCTCTTTTG GTAATCTGGA TAGGATTTGT AATTGTTTAC
GACAGTAAAT TTAATAAAAC CAAACTAGCT TTAAATAACT AA
|
|---|
| Protein sequence | MKPKINYGAI AVFYIIAVIC RFIAVKTDLF KGVEHNDYIF ILIRGLGPAL GAFAAIKLFS
LQNPMSLKGI YSNYILPFVV FWLLPALSIT TLYYFIYGKF PIVFAFTVLV YGLLEEIGWR
GFLQEQLKGL PKFTSIAIIA ILWFVWHLNL NMTTSNLIFL GVIFFGTWGI GKIYSKTGSL
LAVAGVHSLN NFFVKEGVHE QELMVILALL VIWIGFVIVY DSKFNKTKLA LNN
|
|---|
| |