| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3226 |
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| Symbol | |
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| ID | 5093388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3842749 |
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| End bp | 3844158 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644742654 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001195562 |
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| Protein GI | 146300971 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAC TATATAAAAT TGGAATAACG GTATTTTCAG GTATGATTTT AACATCGTGC
GTTGTTGGAA AAAAATATTC CCGCACCGAG TTAAACGCTC CTGATAAATA CCGAGAAGAA
TTAACCGTAA CAGGAGATAC TATTTTGCAT TCCTGGAAAA CGTATTACAA AGACCCGCTT
TTAGTTAATT TGATCGAAAA AGCCCTCGTT AAAAACAACG AGGTGCTTAT CGCGGTCAAA
AGCATGGAAC AGCTGGATTT AAATTATAAA CAAGCCAAAC TGTCTTTACT GCCAACATTG
GATTTTGATG CTGCAGCGAG CCGTTCGTAT TTGTCTAAAA ATTCGTTAAA CGGATCTTTG
AGCGCGCAGT TTACGAGCAA AGATTATATG GACGATTACA GCGCTAATCT TCGTATGTCG
TGGGAAGTAG ATATTTGGGG AAAAGCAACA ATGCAGAAAA GAGATGCAAA AGCAGCGTAT
TTTGCCCAAA AGGAAAACCT TTCGGCTTTA AAAACCCGAA TTATTGTTCA GGTGGCGCAG
TCGTATTACA ATCTTTTAGG TTTAGACGAA CAGCTTAAAA TTGCTGAAAA AAACATCGAA
TTGAGCGATA ATACCCTGCA GATGATGAAA CTGCAGTACA ACTCAGGTTC GATTAGTTCA
TTGGCAGTAA ATCAGACTGA AGCTCAGAAA AAAACAGCAG AATTACTTGT TCCTTTGGCA
AAAACCAATA TCGCGGTTCA GGAAAATGCA CTGCAGATTT TATGCGGCGA ATATCCTAAT
ACGATCGAAC GTTCAGGTAA TTTAAATGTT GATGAATTTG CGTTTGAAAT GCCATCTGGA
GTTCCAGCTT CACTTTTAAG CCGAAGACCG GATGTAAAAT CGAGTGAATA TGCTGTGATG
TCGGCAACAG CCAAAACGGG ATTAGCAAAA GCTACAATGT ATCCAACGCT GAGTTTAAGT
CCGTCAATTG GAATTAATTC ATTTGAGTTC GATACCTGGT TTAATTTTCC GGGTTCGGTT
ACAAAAAATA TAGCAGCAAA TCTGGCACAG CCTATTTTTA GGAAAAAAGC CTTGCGAACT
GCTTATGAAG TAGCGGTTTT AGAACAAGAA AAAGCTGTGG TTCAGTTCAA ACAATCGTTT
ATTACCGCTG TTGGTGAAGT TTCTGATGCC ATGTCGAGAT TAAAATATGC AGATGAACGC
ATTAAGCTGG CAGAAGAAAA AGCAATATCT TTAGAAAAAG CAACTTCAGA TGCTTCACTT
TTATACAAAA GCGGTATGGC CAATTATCTT GAAATTATTG CCGCTCAAAA TAGTGCCTTG
CAAAACGATC TTGATGTCGT AACAATAAAA TTAGAAAAAT TAAATGCCTC TATTAATTTG
TACCGCGCTT TGGGCGGAGG AGTAGAGTAG
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| Protein sequence | MRILYKIGIT VFSGMILTSC VVGKKYSRTE LNAPDKYREE LTVTGDTILH SWKTYYKDPL
LVNLIEKALV KNNEVLIAVK SMEQLDLNYK QAKLSLLPTL DFDAAASRSY LSKNSLNGSL
SAQFTSKDYM DDYSANLRMS WEVDIWGKAT MQKRDAKAAY FAQKENLSAL KTRIIVQVAQ
SYYNLLGLDE QLKIAEKNIE LSDNTLQMMK LQYNSGSISS LAVNQTEAQK KTAELLVPLA
KTNIAVQENA LQILCGEYPN TIERSGNLNV DEFAFEMPSG VPASLLSRRP DVKSSEYAVM
SATAKTGLAK ATMYPTLSLS PSIGINSFEF DTWFNFPGSV TKNIAANLAQ PIFRKKALRT
AYEVAVLEQE KAVVQFKQSF ITAVGEVSDA MSRLKYADER IKLAEEKAIS LEKATSDASL
LYKSGMANYL EIIAAQNSAL QNDLDVVTIK LEKLNASINL YRALGGGVE
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