Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3202 |
Symbol | |
ID | 5093364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3815480 |
End bp | 3818170 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742630 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001195538 |
Protein GI | 146300947 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTAA CAAGTAATGA TGAACTTTTT TATACAATTT TTAACTCTGC GGCAAACGGA CTTATTGCAT TGCAGCCAGT ATACAATAAA GAAAAGATTG AAGATTTCTT ACTACTGTTC TGTAATTCCC GTATTCAAGA ATATTTTGAA GTTGAAGAAT GTAAAAACCA GTTTTTTACA GATATTTTCA AACTTTATGA TGCAGATATT CTCATCGAAA AATTCACCGA AACTCTAGTA AATAGAAAAA ACTCTACTTT TGAAATCAGT TTTGAAATTG GAGAACAATT ATATTGGTTT CGCTTTACAG CAGAAGAAAA AAACGGTTTA CTAATCGTTA CTGTTGAAAA CATAACTGAA TATAAAACAA AGAGAAACAA TCTTATTGCC GCACTAACAG CGATTGAAAA GCAGGAAAGA TTTTATAATT CCATTACCAA TACCACACCA GATTTGGTGT ATGTATTTGA CCTTGCATAT AATTTTACGT ATGCCAACAA AGCTTTGTTG GATATGTGGG GTAAGTCAGC GCAAGATGCT ATAGGTAAAG GCTTAAGAGA TAACGGTTAC GAAGAATGGC ACGCAGTGAT GCATGAAAGA GAAATAGACG ACGTTGTTGC TAATAAAAAA ATGATTAGAG GCACCGTATC CTTTCCTCAC GCAGAATTAG GACGAAGAGT TTATGACTAC ATTTTTGCTC CGGTTTTTAA TAAGCAGGGA GAAGTAGAAG CGATAGCCGG AACAACACGC GATATTACAG AAATAAAACT GGCGGAAGAA CAGCAGTTTT TAGCAAGAAA AAGGATAGAA GAAAGTGAAT CCAGACTGCA GTCTATGATT CACCAGACAC CTTCGGCTAC ATTGGTGCTT ATGGGAGCAG ATTTGGTAAT CGAGCAGATT AATAGACAAA TGCTTGCTTT AATTGGCCGT GGCGAAGAAA TTATAGGCAT GCGGTTGATT GATGTTCTTC CGGAATTAAA CGGGCAATAT GTTTGGACAC AGGTGCAGAA CGTTTACAAT AAAGGAATTC CTTTTGATCA GGCAGAAGTG CTTGTTCAGC ATAACCGAAC AGGTGAAATG CGCGACTATT ATTATAATCT GGCCTATCGT CCTTTAGTTC AGGATGGGGT GATAACAGGA ATGATTCAGG TAGCAGAGGA TGTGACAGAA CAGGTTACGG CAAGAAATAA AATGGAAGAA AGCGAAAAGC GTTTCAGAGC TTTAGTAAAT GCTTCTTCAG ATTTTGTGTA TCGTATGAAT GCAGACTGGA CTGTAATGAG AAGTTTAGAA ACACTGGATT CTTATGCATC AGAAGGCGAA CCAGTTTCTA ATTGGATTAA CAGTTATATT CATCCTGATG ACCGAAAAAA GGCTTTGAAA CTTATATCTG AAGCAATAGA TAATAAAAGT ATTTTCCAAT TAGAACATAG AGTTCTAAAT GCAAATGGTA CTATTGGCTG GAATTTTTCC AGAGTAGTTC CTATATTAGA CGATAATAAT ACTATCATTG AGTGGTTTGG TGCCGCAAGT GATATTACTT CACAAAAAGA AGTACAGCAG ATTATTAATG AAAGTGCAGA AAATTTTCGA CAGCTTGCCG ATTTGGTACC TCAGATTATA TGGACAAGCA GGCCGGATGG TTTTATTGAT TATTATAATA AGCGCTGGTA CGAGTATACG AATTTGAAAG AAAATGAATA TGGTGATTCG AGCTGGATTT CTGTATTACA CCCGGATGAT GTAGAATTAG TTAAAGATAA TTGGTATGAG AGTATCCAAT CTGGTAATTT TTATCAGCTT GAATTTCGAT TAAAAGATAG TGTTACAGGA GAGTATCGCT GGTTTTTAAG TAAAGCAGTT CCTATCAGGG ATGCATCAGG AGCTATTACA AAATGGTTTG GTACATGTAC AGATATCCAT GAACAAAAAA CTGCTACCGA AAAATTAGAA GTCCTGATAA ATGAACGCAC ACGGGAACTA CAGCGTTCTA ATGAAGACTT GCAGCAGTTT GCTCATGTCG CTTCCCATGA TTTAAAAGAA CCGGTACGAA AAATAAAAAC TTTTATAAGC AGACTTGAAG ATAATCTTGA AGGAAAACTC GATGACTCGG CAAAGAAATT CATTGACAGA ATACACGTCG CATCAGATCG AATGTTTAAC ATGATAGAAG GTGTTCTGGC GTATTCTAAA ATAAATGCAG ATCAACAGAA ACCAACAGTA GTGGATCTAA ATGAAGTTTT AAAAAATATT GAAACCGATT TAGAAGTTTC TTTACAAAAA ACAGGCGGTG AAATCTATTA TGATAATCTT CCTGTTCTGG AAGGCGCACA GGTATTATTG TACCAGCTTT TTTACAACCT GATTAATAAT TCTATTAAGT TCGCTAAAGA CGATGTTCCG GTTAAAGTAA AATTATCCTC AAAAATAATA AAACAACAGG ATAATGATTT TGCCGTTATT ACTGTAGAAG ATAATGGAAT TGGTTTTAAC GAAAATCAGG CAGAAAGAAT ATTCGAAACT TTTACAAGAC TTAATTCTAA AGATTCTTAC GAAGGTACAG GTCTGGGATT ATCGCTCTGT AAAAAAATAG TTGAACGCCA TGCAGGAACT ATAACTGCAT CGGGAAGTCC ATATAATGGA GCAGTATTTA CTATAGTGCT TCCTTTGAAA CAAGAAGAAA ATGATATTTA A
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Protein sequence | MELTSNDELF YTIFNSAANG LIALQPVYNK EKIEDFLLLF CNSRIQEYFE VEECKNQFFT DIFKLYDADI LIEKFTETLV NRKNSTFEIS FEIGEQLYWF RFTAEEKNGL LIVTVENITE YKTKRNNLIA ALTAIEKQER FYNSITNTTP DLVYVFDLAY NFTYANKALL DMWGKSAQDA IGKGLRDNGY EEWHAVMHER EIDDVVANKK MIRGTVSFPH AELGRRVYDY IFAPVFNKQG EVEAIAGTTR DITEIKLAEE QQFLARKRIE ESESRLQSMI HQTPSATLVL MGADLVIEQI NRQMLALIGR GEEIIGMRLI DVLPELNGQY VWTQVQNVYN KGIPFDQAEV LVQHNRTGEM RDYYYNLAYR PLVQDGVITG MIQVAEDVTE QVTARNKMEE SEKRFRALVN ASSDFVYRMN ADWTVMRSLE TLDSYASEGE PVSNWINSYI HPDDRKKALK LISEAIDNKS IFQLEHRVLN ANGTIGWNFS RVVPILDDNN TIIEWFGAAS DITSQKEVQQ IINESAENFR QLADLVPQII WTSRPDGFID YYNKRWYEYT NLKENEYGDS SWISVLHPDD VELVKDNWYE SIQSGNFYQL EFRLKDSVTG EYRWFLSKAV PIRDASGAIT KWFGTCTDIH EQKTATEKLE VLINERTREL QRSNEDLQQF AHVASHDLKE PVRKIKTFIS RLEDNLEGKL DDSAKKFIDR IHVASDRMFN MIEGVLAYSK INADQQKPTV VDLNEVLKNI ETDLEVSLQK TGGEIYYDNL PVLEGAQVLL YQLFYNLINN SIKFAKDDVP VKVKLSSKII KQQDNDFAVI TVEDNGIGFN ENQAERIFET FTRLNSKDSY EGTGLGLSLC KKIVERHAGT ITASGSPYNG AVFTIVLPLK QEENDI
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