Gene Fjoh_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3202 
Symbol 
ID5093364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3815480 
End bp3818170 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content36% 
IMG OID644742630 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001195538 
Protein GI146300947 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA CAAGTAATGA TGAACTTTTT TATACAATTT TTAACTCTGC GGCAAACGGA 
CTTATTGCAT TGCAGCCAGT ATACAATAAA GAAAAGATTG AAGATTTCTT ACTACTGTTC
TGTAATTCCC GTATTCAAGA ATATTTTGAA GTTGAAGAAT GTAAAAACCA GTTTTTTACA
GATATTTTCA AACTTTATGA TGCAGATATT CTCATCGAAA AATTCACCGA AACTCTAGTA
AATAGAAAAA ACTCTACTTT TGAAATCAGT TTTGAAATTG GAGAACAATT ATATTGGTTT
CGCTTTACAG CAGAAGAAAA AAACGGTTTA CTAATCGTTA CTGTTGAAAA CATAACTGAA
TATAAAACAA AGAGAAACAA TCTTATTGCC GCACTAACAG CGATTGAAAA GCAGGAAAGA
TTTTATAATT CCATTACCAA TACCACACCA GATTTGGTGT ATGTATTTGA CCTTGCATAT
AATTTTACGT ATGCCAACAA AGCTTTGTTG GATATGTGGG GTAAGTCAGC GCAAGATGCT
ATAGGTAAAG GCTTAAGAGA TAACGGTTAC GAAGAATGGC ACGCAGTGAT GCATGAAAGA
GAAATAGACG ACGTTGTTGC TAATAAAAAA ATGATTAGAG GCACCGTATC CTTTCCTCAC
GCAGAATTAG GACGAAGAGT TTATGACTAC ATTTTTGCTC CGGTTTTTAA TAAGCAGGGA
GAAGTAGAAG CGATAGCCGG AACAACACGC GATATTACAG AAATAAAACT GGCGGAAGAA
CAGCAGTTTT TAGCAAGAAA AAGGATAGAA GAAAGTGAAT CCAGACTGCA GTCTATGATT
CACCAGACAC CTTCGGCTAC ATTGGTGCTT ATGGGAGCAG ATTTGGTAAT CGAGCAGATT
AATAGACAAA TGCTTGCTTT AATTGGCCGT GGCGAAGAAA TTATAGGCAT GCGGTTGATT
GATGTTCTTC CGGAATTAAA CGGGCAATAT GTTTGGACAC AGGTGCAGAA CGTTTACAAT
AAAGGAATTC CTTTTGATCA GGCAGAAGTG CTTGTTCAGC ATAACCGAAC AGGTGAAATG
CGCGACTATT ATTATAATCT GGCCTATCGT CCTTTAGTTC AGGATGGGGT GATAACAGGA
ATGATTCAGG TAGCAGAGGA TGTGACAGAA CAGGTTACGG CAAGAAATAA AATGGAAGAA
AGCGAAAAGC GTTTCAGAGC TTTAGTAAAT GCTTCTTCAG ATTTTGTGTA TCGTATGAAT
GCAGACTGGA CTGTAATGAG AAGTTTAGAA ACACTGGATT CTTATGCATC AGAAGGCGAA
CCAGTTTCTA ATTGGATTAA CAGTTATATT CATCCTGATG ACCGAAAAAA GGCTTTGAAA
CTTATATCTG AAGCAATAGA TAATAAAAGT ATTTTCCAAT TAGAACATAG AGTTCTAAAT
GCAAATGGTA CTATTGGCTG GAATTTTTCC AGAGTAGTTC CTATATTAGA CGATAATAAT
ACTATCATTG AGTGGTTTGG TGCCGCAAGT GATATTACTT CACAAAAAGA AGTACAGCAG
ATTATTAATG AAAGTGCAGA AAATTTTCGA CAGCTTGCCG ATTTGGTACC TCAGATTATA
TGGACAAGCA GGCCGGATGG TTTTATTGAT TATTATAATA AGCGCTGGTA CGAGTATACG
AATTTGAAAG AAAATGAATA TGGTGATTCG AGCTGGATTT CTGTATTACA CCCGGATGAT
GTAGAATTAG TTAAAGATAA TTGGTATGAG AGTATCCAAT CTGGTAATTT TTATCAGCTT
GAATTTCGAT TAAAAGATAG TGTTACAGGA GAGTATCGCT GGTTTTTAAG TAAAGCAGTT
CCTATCAGGG ATGCATCAGG AGCTATTACA AAATGGTTTG GTACATGTAC AGATATCCAT
GAACAAAAAA CTGCTACCGA AAAATTAGAA GTCCTGATAA ATGAACGCAC ACGGGAACTA
CAGCGTTCTA ATGAAGACTT GCAGCAGTTT GCTCATGTCG CTTCCCATGA TTTAAAAGAA
CCGGTACGAA AAATAAAAAC TTTTATAAGC AGACTTGAAG ATAATCTTGA AGGAAAACTC
GATGACTCGG CAAAGAAATT CATTGACAGA ATACACGTCG CATCAGATCG AATGTTTAAC
ATGATAGAAG GTGTTCTGGC GTATTCTAAA ATAAATGCAG ATCAACAGAA ACCAACAGTA
GTGGATCTAA ATGAAGTTTT AAAAAATATT GAAACCGATT TAGAAGTTTC TTTACAAAAA
ACAGGCGGTG AAATCTATTA TGATAATCTT CCTGTTCTGG AAGGCGCACA GGTATTATTG
TACCAGCTTT TTTACAACCT GATTAATAAT TCTATTAAGT TCGCTAAAGA CGATGTTCCG
GTTAAAGTAA AATTATCCTC AAAAATAATA AAACAACAGG ATAATGATTT TGCCGTTATT
ACTGTAGAAG ATAATGGAAT TGGTTTTAAC GAAAATCAGG CAGAAAGAAT ATTCGAAACT
TTTACAAGAC TTAATTCTAA AGATTCTTAC GAAGGTACAG GTCTGGGATT ATCGCTCTGT
AAAAAAATAG TTGAACGCCA TGCAGGAACT ATAACTGCAT CGGGAAGTCC ATATAATGGA
GCAGTATTTA CTATAGTGCT TCCTTTGAAA CAAGAAGAAA ATGATATTTA A
 
Protein sequence
MELTSNDELF YTIFNSAANG LIALQPVYNK EKIEDFLLLF CNSRIQEYFE VEECKNQFFT 
DIFKLYDADI LIEKFTETLV NRKNSTFEIS FEIGEQLYWF RFTAEEKNGL LIVTVENITE
YKTKRNNLIA ALTAIEKQER FYNSITNTTP DLVYVFDLAY NFTYANKALL DMWGKSAQDA
IGKGLRDNGY EEWHAVMHER EIDDVVANKK MIRGTVSFPH AELGRRVYDY IFAPVFNKQG
EVEAIAGTTR DITEIKLAEE QQFLARKRIE ESESRLQSMI HQTPSATLVL MGADLVIEQI
NRQMLALIGR GEEIIGMRLI DVLPELNGQY VWTQVQNVYN KGIPFDQAEV LVQHNRTGEM
RDYYYNLAYR PLVQDGVITG MIQVAEDVTE QVTARNKMEE SEKRFRALVN ASSDFVYRMN
ADWTVMRSLE TLDSYASEGE PVSNWINSYI HPDDRKKALK LISEAIDNKS IFQLEHRVLN
ANGTIGWNFS RVVPILDDNN TIIEWFGAAS DITSQKEVQQ IINESAENFR QLADLVPQII
WTSRPDGFID YYNKRWYEYT NLKENEYGDS SWISVLHPDD VELVKDNWYE SIQSGNFYQL
EFRLKDSVTG EYRWFLSKAV PIRDASGAIT KWFGTCTDIH EQKTATEKLE VLINERTREL
QRSNEDLQQF AHVASHDLKE PVRKIKTFIS RLEDNLEGKL DDSAKKFIDR IHVASDRMFN
MIEGVLAYSK INADQQKPTV VDLNEVLKNI ETDLEVSLQK TGGEIYYDNL PVLEGAQVLL
YQLFYNLINN SIKFAKDDVP VKVKLSSKII KQQDNDFAVI TVEDNGIGFN ENQAERIFET
FTRLNSKDSY EGTGLGLSLC KKIVERHAGT ITASGSPYNG AVFTIVLPLK QEENDI