Gene Fjoh_3154 details

Gene Information

• Locus tag: Fjoh_3154
• ID: 5093150
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 3747352
• End bp: 3748041
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 644742582
• Product: hypothetical protein
• Protein accession: YP_001195490
• Protein GI: 146300899
• COG category: [S] Function unknown
• COG ID: [COG1652] Uncharacterized protein containing LysM domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACTG GTGAATTAAA AAAACTGAAG ATTATTGCGT ACAGCGATCC GCAATTCAAC 
AATCCCGTTT CGGATATTGA AGAGTTTGTT ACTTTGATGA ATCCCGAAAA ATACACTTTT 
CATTACAAGA TTGAGCAAGA TACAACCCAG GCAGCCGGAA CGAGCAGTCC CGCACCAAGG 
TTTACTGCAA TTGCTCCGGA GGAATTAGAA CTGGATTTTG TTTTTGACCG AACTGGCGTT 
ATTGCCGGAA AGGAAAGCAC AGAAAATGGT GTTATTGAAG ACATTGAGCA TTTTAGAAAA 
GTAATTTTAG AATACAACGG TACAGAACAT AAGCCAAACT ATTTAAAAAT TGCCTGGGGA 
AGCCTTTTAT TCAAAGGATC TCTCACAGAA ATGACTATTG AGTATAAACT TTTCAGACCA 
GATGGTACGC CTATTAGAGC CATTGCAAAA GGAAAATTCA AAGGTGTTGT TGAAGATGAA 
TTAAGAGCAA AACAGCAAAA CAATCAATCA CCAGATTTAA CGCATACCAG AATTGTAAAA 
GCGGGCGATA CGCTTCCGTT AATGTCTTTT AAAATCTATG GCGATTCAAA ATATTATCTC 
GAAGTAGCAA AAGCCAATAA GCTTATCAAT TTCAGAAAAT TAAAAATCGG CCAGAAAATA 
TTTTTTCCTC CACTGCAAAA ACAACAATAG 

 

Protein sequence

MTTGELKKLK IIAYSDPQFN NPVSDIEEFV TLMNPEKYTF HYKIEQDTTQ AAGTSSPAPR 
FTAIAPEELE LDFVFDRTGV IAGKESTENG VIEDIEHFRK VILEYNGTEH KPNYLKIAWG 
SLLFKGSLTE MTIEYKLFRP DGTPIRAIAK GKFKGVVEDE LRAKQQNNQS PDLTHTRIVK 
AGDTLPLMSF KIYGDSKYYL EVAKANKLIN FRKLKIGQKI FFPPLQKQQ