Gene Fjoh_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3133 
Symbol 
ID5093129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3722936 
End bp3724567 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content37% 
IMG OID644742561 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001195469 
Protein GI146300878 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.863254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAA TTGTAAAAAT TAATCTAGAC AATGAAATGG ACCTCATACT GGCTCATAAA 
CGGTCAATGA AAATTGCTGA AATGTGCGGT ATGCCGCTTT CGGCTCAGAC CCGTTTTTCT
ACAGCTGTTT CAGAAGTGGC ACGATGCTCC ATTGCCAATG GGAAAAATTC TGTGCTGGTT
TTGGGAATTA ATACCATTAG AGCAAGCCAC AAAGAAATAA TGGCTGTGCT TACAGATAAA
GTCGATCTTA AAAAATGCAA TCCTGAAGCC TATAAATATG CTGCCAAAAT ATCAGGCAAT
ATAGAATATA ATTATGCTGA CAACAAATCA GTAACAACTT TAAGCCATCA AGTCCCGTCA
CCCGGGCTTC TTTCAGATGC AAAGATCAAT ACTCTGGCAG ATTATTTCAA ATACGAACCG
CCAATTTCTG CTTATGATGA AATCAGAAAA AAGAATATTG AGCTTGTAGC ACTTTCAGAA
AAGCTGGGAG AAAGTGAAAA TCGATATAGA AACTTAGTGG ATACAATTCC CGTTTTAATC
TGCATCGTTA ATGACCGAAA TATGGTGCTG CTGGCAAATA ATGCATTTGA ATTTTATCTA
AAAGTTCCTT TACTTTCTTT TGATAAAAAA AGCCTGAGCG CATTTATACA TCATGACGAT
GTACAGCTGA TTATTGAAGG ATGGAGTAAT GCAAAAAAAA ACAGAGGAGA TTTTTCTGCC
GATATTCGTA TTAAAAAAGA AGACATTTAT ATTTGGCATA ATATTTCTAT TATGCCAAAT
AAAGCCGAAG ATGGTTCTGT AGGCAGCTGG CTTATTTATT TTGTAAATAA TAATGCCCAA
AAAATGATTG TTGAAGCGCT GAAGGATAAT TCAGAGCTTA GAAAAATTCA GCTTGAGCTG
GAAAGTGCGA ACTCAAAACT TCAATTCAAA AACAAGGAAC TGGAGCAGTT TGCCTTTATA
ACAAGTCATG ATCTTCAGGA ACCGCTGCGA AAAATCATGA TTATGATTTC AAGAGCAGCA
GAACATTTGA CTGAGCAGCA GAAAACGCTT TATTATTTTG ATAAAATTAC GATGGCAGCC
GGCAGATTAT CTAATTTGAT TTCAGACGTT CTTAATTACT CCCGTGTCAA TAATCATGAT
AAATTTACTG CAGAAGTTGA TCTTAATGAT ATCGTTGCAC AGACTTTAGA AGATTTGAGT
CTTATTATTG AAGAAAAAAA AGCCGTTGTA AATTTAAGTC CGCTTCCAGC TGTTAATGGA
ATAGGGACCC AGCTGCGCCA GCTGTTTTAT AATTTAATAA ATAATGCATT AAAATTTAAT
ACAGCACACC CGGCAGTAAA TATATCGTAC CGTCTAATTT CAGCCCAAAG CAACACCTCT
TTTGATCCTC AGGCTCCGTC AGGGAATTTT CATGTAATTT CAATTGAAGA TAATGGAATT
GGAATGGACA GCGAATATTC AGGCCGCATT TTTGATATGT TCCAGCGCCT GCACCAAAGA
GATCAGTACA GCGGGAATGG TATTGGGCTG GCCTTGTGCA AACGTATTAT TGAAAACCAT
AACGGAACCA TTAATTTTAC CAGTATACCA GGAAAGGGAA CAACTTTTTG GATCTACCTG
CCAAAAAATT AA
 
Protein sequence
MKEIVKINLD NEMDLILAHK RSMKIAEMCG MPLSAQTRFS TAVSEVARCS IANGKNSVLV 
LGINTIRASH KEIMAVLTDK VDLKKCNPEA YKYAAKISGN IEYNYADNKS VTTLSHQVPS
PGLLSDAKIN TLADYFKYEP PISAYDEIRK KNIELVALSE KLGESENRYR NLVDTIPVLI
CIVNDRNMVL LANNAFEFYL KVPLLSFDKK SLSAFIHHDD VQLIIEGWSN AKKNRGDFSA
DIRIKKEDIY IWHNISIMPN KAEDGSVGSW LIYFVNNNAQ KMIVEALKDN SELRKIQLEL
ESANSKLQFK NKELEQFAFI TSHDLQEPLR KIMIMISRAA EHLTEQQKTL YYFDKITMAA
GRLSNLISDV LNYSRVNNHD KFTAEVDLND IVAQTLEDLS LIIEEKKAVV NLSPLPAVNG
IGTQLRQLFY NLINNALKFN TAHPAVNISY RLISAQSNTS FDPQAPSGNF HVISIEDNGI
GMDSEYSGRI FDMFQRLHQR DQYSGNGIGL ALCKRIIENH NGTINFTSIP GKGTTFWIYL
PKN