Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3133 |
Symbol | |
ID | 5093129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3722936 |
End bp | 3724567 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644742561 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001195469 |
Protein GI | 146300878 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.863254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA TTGTAAAAAT TAATCTAGAC AATGAAATGG ACCTCATACT GGCTCATAAA CGGTCAATGA AAATTGCTGA AATGTGCGGT ATGCCGCTTT CGGCTCAGAC CCGTTTTTCT ACAGCTGTTT CAGAAGTGGC ACGATGCTCC ATTGCCAATG GGAAAAATTC TGTGCTGGTT TTGGGAATTA ATACCATTAG AGCAAGCCAC AAAGAAATAA TGGCTGTGCT TACAGATAAA GTCGATCTTA AAAAATGCAA TCCTGAAGCC TATAAATATG CTGCCAAAAT ATCAGGCAAT ATAGAATATA ATTATGCTGA CAACAAATCA GTAACAACTT TAAGCCATCA AGTCCCGTCA CCCGGGCTTC TTTCAGATGC AAAGATCAAT ACTCTGGCAG ATTATTTCAA ATACGAACCG CCAATTTCTG CTTATGATGA AATCAGAAAA AAGAATATTG AGCTTGTAGC ACTTTCAGAA AAGCTGGGAG AAAGTGAAAA TCGATATAGA AACTTAGTGG ATACAATTCC CGTTTTAATC TGCATCGTTA ATGACCGAAA TATGGTGCTG CTGGCAAATA ATGCATTTGA ATTTTATCTA AAAGTTCCTT TACTTTCTTT TGATAAAAAA AGCCTGAGCG CATTTATACA TCATGACGAT GTACAGCTGA TTATTGAAGG ATGGAGTAAT GCAAAAAAAA ACAGAGGAGA TTTTTCTGCC GATATTCGTA TTAAAAAAGA AGACATTTAT ATTTGGCATA ATATTTCTAT TATGCCAAAT AAAGCCGAAG ATGGTTCTGT AGGCAGCTGG CTTATTTATT TTGTAAATAA TAATGCCCAA AAAATGATTG TTGAAGCGCT GAAGGATAAT TCAGAGCTTA GAAAAATTCA GCTTGAGCTG GAAAGTGCGA ACTCAAAACT TCAATTCAAA AACAAGGAAC TGGAGCAGTT TGCCTTTATA ACAAGTCATG ATCTTCAGGA ACCGCTGCGA AAAATCATGA TTATGATTTC AAGAGCAGCA GAACATTTGA CTGAGCAGCA GAAAACGCTT TATTATTTTG ATAAAATTAC GATGGCAGCC GGCAGATTAT CTAATTTGAT TTCAGACGTT CTTAATTACT CCCGTGTCAA TAATCATGAT AAATTTACTG CAGAAGTTGA TCTTAATGAT ATCGTTGCAC AGACTTTAGA AGATTTGAGT CTTATTATTG AAGAAAAAAA AGCCGTTGTA AATTTAAGTC CGCTTCCAGC TGTTAATGGA ATAGGGACCC AGCTGCGCCA GCTGTTTTAT AATTTAATAA ATAATGCATT AAAATTTAAT ACAGCACACC CGGCAGTAAA TATATCGTAC CGTCTAATTT CAGCCCAAAG CAACACCTCT TTTGATCCTC AGGCTCCGTC AGGGAATTTT CATGTAATTT CAATTGAAGA TAATGGAATT GGAATGGACA GCGAATATTC AGGCCGCATT TTTGATATGT TCCAGCGCCT GCACCAAAGA GATCAGTACA GCGGGAATGG TATTGGGCTG GCCTTGTGCA AACGTATTAT TGAAAACCAT AACGGAACCA TTAATTTTAC CAGTATACCA GGAAAGGGAA CAACTTTTTG GATCTACCTG CCAAAAAATT AA
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Protein sequence | MKEIVKINLD NEMDLILAHK RSMKIAEMCG MPLSAQTRFS TAVSEVARCS IANGKNSVLV LGINTIRASH KEIMAVLTDK VDLKKCNPEA YKYAAKISGN IEYNYADNKS VTTLSHQVPS PGLLSDAKIN TLADYFKYEP PISAYDEIRK KNIELVALSE KLGESENRYR NLVDTIPVLI CIVNDRNMVL LANNAFEFYL KVPLLSFDKK SLSAFIHHDD VQLIIEGWSN AKKNRGDFSA DIRIKKEDIY IWHNISIMPN KAEDGSVGSW LIYFVNNNAQ KMIVEALKDN SELRKIQLEL ESANSKLQFK NKELEQFAFI TSHDLQEPLR KIMIMISRAA EHLTEQQKTL YYFDKITMAA GRLSNLISDV LNYSRVNNHD KFTAEVDLND IVAQTLEDLS LIIEEKKAVV NLSPLPAVNG IGTQLRQLFY NLINNALKFN TAHPAVNISY RLISAQSNTS FDPQAPSGNF HVISIEDNGI GMDSEYSGRI FDMFQRLHQR DQYSGNGIGL ALCKRIIENH NGTINFTSIP GKGTTFWIYL PKN
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