| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3127 |
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| Symbol | |
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| ID | 5093123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3712984 |
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| End bp | 3715995 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644742555 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001195463 |
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| Protein GI | 146300872 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00375079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC TTAAACTTTT ATTATTAGCC TTATTCTTTG GCTTCTCCAT TAATACCTGG
GCACAAAAAA CAGATGTGAC TGGTGTAGTT TTAGATGACA AAGGAATTCC ACTTCCAGCC
GCTAACGTAC TAGAAAAAGG TACGAGTAAT ACTGTAACGA CAGATTTTGA TGGGAAATTT
AGAATTTCGG TTTCAAACAA AAATGCAACT CTGGTATTTT CTTTTATAGG ATTTGAAGAT
CAGCCAGTAA AATTAGACGG AACAAAAACA AATCTTTCCA TAAAGTTACA ATCGGGTACT
ACTAACCTGG AGCAAGTTGT AGTAGTAGGT TATGGTAAAG GTTCTCGTAA AAACTTAACT
ACAGCTGTAA CTTCTATAAA AGCAGATGAA TTAAACCGAG GTGCTATCAG CGATGTTGGA
CAGCTTTTAC AAGGTAAAGT TTCTGGTTTA AATATTTCAT CCAGCGGCGA CCCTACAAAA
ACTGCTTCGG TAGTTTTACG TGGTGCATCT ACATTAAATA GTTCGCAAGG TCCTTTTTAT
GTAATTGATG GAGTTCCCGG AGTAGATATT TCAATTATTT CTCCAGATGA CATTGCTACG
ATCGATGTTT TAAAAGATGC CGCTGCAACA GCTATTTATG GTAACCGTGC AGCAAATGGT
GTAATCATGG TAACTACTAA AAGAGGAAGT AAAGACAGAA CACAGATTGC TTATAATGGA
TATTATGGTT TTGAAGAAGT TTCGAACGAA CTGAATATGA TGAATGCAGA TCAGCTTAGA
GCTTTTACAA CTAAAAACAA TCTGAACTTT ACACCGGAAA ATGATAAAGG AGCTAATACA
GACTGGCAGA AAGAAATTTT AAGATCAAGA CGTGCCGTAT CCAGCAGTCA TAATATTTCG
ATGAGCGGTG GCGGCGAGCA CGGAAATTAT ACGGCAAGTA TTACTTCGAT CCAAAAAGAA
GGAGTATTGT TAAAAAGTGA TTTCTCTCGT GTTATTGCCC GTTTATCTGT AGATCAATAT
GCTTTTGATG ATAAACTTAA AATAGGTCTT AATGTTACCA ATTCGACAAG TAATTATACC
AATGTTCCAC AACGTAATAC GGTACTTTTA CAAGCGGTAA GCCACCTTCC GGTTTCACCG
GTAAGAAATC CTGATGGAAG CTTTTTCGAA AACTTTGTAA GCACAGGATA TTTTAACCCA
GTTGCTTTAA TTGAGCACGG AACAGATGAA ACAAAAACAA ATAATCTTGT TGGAAACATT
ACTGCAGAAT TAAAACTGCC TTGGGGTTTT ACGTATAACT TAAATGTGGC ACACCAAAGA
TTATCTACAT CTCATGGAGA GTTCTATGAT AGTTATTATT CAAGATACAA TAGTGCGAAT
TTTTACAACA ATCCAGATCC GCCTCAAACA AAAACGTTGA TTAATTTTGG TGTAAATGGT
TCTGCATTAA GAAATTCGTA TGATAATACA AACAACATTG TTGAGAGTTT CCTAAACTGG
GATAAAACTT TAGGCGGCCA TAAAATAAAA GCTGTTTTAG GATATTCATG GCAGGAAAAC
ACTTATGGTG ACGGATTCCA AGCAACAGCA ACTAATTTTC CTGTAGATAA TGTTGGGTAC
AATAACCTTG CTTTGAGCAA CTATACTTCT GTAAACGGTT ATGTTGTAAA TTTTGGAGAC
AGTAAAGCAT ATCAAAAAAC ACGTTTAATT GGAGAATTCG TTCGTTTGAA CTATGGTTAC
AAAGACAAAT ACCTTTTACA GGGAACATTA AGAAGAGACG GAGGTTCTAT GTTTGGAGCT
AATAACCGCT GGGGATTTTT CCCTTCTGTG GGTGGAGCCT GGAGAGTTGA CAAAGAAAAC
TTCATGAAAA ATCAAAACTT CTTTACTGAC TTAAAATTCA GAGGAAGTTA TGGTGTAACA
GGGAACTCAT CAGGGTTTAA TGCTTATACT GCACAGTTTA TCTCAGGAAG TGTTGGAACT
TTTTATTACA ACGGACAGCA GATTGGAGCT TACGGACCAA ATCAGGCAGC AAATCCAGAT
TTGAAATGGG AAAAAACAGC AACAGCAAAC GTTGGGGTTG ACTTTTCTAT CTTAAAAGGA
AAAATTACTG GTTCTGTTGA TGTTTACGAC AAGAAAACAA CTGATATGAT TTTTAACTAT
GCTGTAAATC CAGTACTTGT GCCAGTAGGA ACAATTGTAG CAAACGGAGG AACAATGTCT
AATAAAGGTA TTGAGGTTAG TTTAGGGGCA ACACCTGTAA AAACGGCAAA TTTCAGCTGG
TCTACCAATT TGAACCTGGC AAGCAACAAA AACAGAATCG TGAAATTGAC AAATCCGTTG
TTTATTGGTG GAGACTCTAT TAGAAGAGTA CAGCCTGATG GAGGCGGACA AACAGGAAGT
ACTTTACAGA TTTTTAAAGA AGGAAAACCT CTTGGACAGT TCTTTACCCT TAAATATGCA
GGAAAAGATG CAAACGGAGT TTCACAGTAC TACGATAAAA ATGGAAATTT AACAACAACA
CCATTAAACG GAGTAGATTA TCATTATGTT GGAGATGCAC AGCCAAAACT ATTATTAGGA
TGGGGAAATA CGTTTACTTA CAAAAAGTTT GATTTAAGTG TGTTCTTCAG AGGAGTATTC
GGAAACAAAA TTTTCAATGC AACACGTGCC GATTTATTTA GGCCGAGTAC CGCAATGACC
ACAAATATTT TGGTTGACGC TCAGGACGAA TCGCCAAATG ATTTGAACTC TTATAAATAC
TCGTCAAGAT TTATTGAAGA CGGAAGTTAT TTAAGATTAG ACAACATGAC TTTAGGGTAC
AATTTTGGTA AAGTCGGGAA ATTTATACAA AGCGTTCGTG TTTACGAAAC GATAAATAAC
CTTTTTGTAA TTACCAAATA TTCAGGAATT GATCCGGAAG TTGAACAAGG AGGAACCGCT
CCGGGTGTAG ATTCGAACAA CTTTTATCCT AAAACCAGAA CTTTTATGTT TGGTTTAAAC
GTAATTTTCT AA
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| Protein sequence | MEKLKLLLLA LFFGFSINTW AQKTDVTGVV LDDKGIPLPA ANVLEKGTSN TVTTDFDGKF
RISVSNKNAT LVFSFIGFED QPVKLDGTKT NLSIKLQSGT TNLEQVVVVG YGKGSRKNLT
TAVTSIKADE LNRGAISDVG QLLQGKVSGL NISSSGDPTK TASVVLRGAS TLNSSQGPFY
VIDGVPGVDI SIISPDDIAT IDVLKDAAAT AIYGNRAANG VIMVTTKRGS KDRTQIAYNG
YYGFEEVSNE LNMMNADQLR AFTTKNNLNF TPENDKGANT DWQKEILRSR RAVSSSHNIS
MSGGGEHGNY TASITSIQKE GVLLKSDFSR VIARLSVDQY AFDDKLKIGL NVTNSTSNYT
NVPQRNTVLL QAVSHLPVSP VRNPDGSFFE NFVSTGYFNP VALIEHGTDE TKTNNLVGNI
TAELKLPWGF TYNLNVAHQR LSTSHGEFYD SYYSRYNSAN FYNNPDPPQT KTLINFGVNG
SALRNSYDNT NNIVESFLNW DKTLGGHKIK AVLGYSWQEN TYGDGFQATA TNFPVDNVGY
NNLALSNYTS VNGYVVNFGD SKAYQKTRLI GEFVRLNYGY KDKYLLQGTL RRDGGSMFGA
NNRWGFFPSV GGAWRVDKEN FMKNQNFFTD LKFRGSYGVT GNSSGFNAYT AQFISGSVGT
FYYNGQQIGA YGPNQAANPD LKWEKTATAN VGVDFSILKG KITGSVDVYD KKTTDMIFNY
AVNPVLVPVG TIVANGGTMS NKGIEVSLGA TPVKTANFSW STNLNLASNK NRIVKLTNPL
FIGGDSIRRV QPDGGGQTGS TLQIFKEGKP LGQFFTLKYA GKDANGVSQY YDKNGNLTTT
PLNGVDYHYV GDAQPKLLLG WGNTFTYKKF DLSVFFRGVF GNKIFNATRA DLFRPSTAMT
TNILVDAQDE SPNDLNSYKY SSRFIEDGSY LRLDNMTLGY NFGKVGKFIQ SVRVYETINN
LFVITKYSGI DPEVEQGGTA PGVDSNNFYP KTRTFMFGLN VIF
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