| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3118 |
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| Symbol | |
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| ID | 5093114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3694041 |
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| End bp | 3697172 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644742546 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001195454 |
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| Protein GI | 146300863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAA CCAAAATATT TTTTATAAGC CTTTTACTGC TTTTCTCGGC GGGTATTTGG
GCTCAGGAAA AAGACCGCAA CGATTGGGAA AATCCTGAAG TATTTCAAAT TAACAGAGAA
CCAGCCCGCG CTGCTTTTCT TCCTTATGCA GATGAAACTT CTGCTATAAT GGATAAATAT
GAAAATTCGC CTTGGTATTT TTCTTTAAAC GGTACATGGA AATTTTCCTG GTCGCAAACG
CCAGACGAGC GCCCGAAGGA TTTTTACAAA ACAGATTTCA GTACGCTGCA TTGGAAAGAT
CTTCAAGTGC CTTCCAATTG GGAACTGCAT GGTTACGGCG TGCCAATTTA TACTAATATC
ACGTATCCAT TCGAAAAAAA TCCGCCTTTT ATCAATCATT GGGATAATCC TGTTGGTTCT
TATAAAAGAG ATTTTGTACT GCCAGAAAAC TGGAAAAACC GACATGTTTT TCTTCATTTT
GAAGCAGGAA CAGCGGCGAT GTATATTTGG GTAAACGGCG AAAAAGTTGG TTATACAGAA
AATACCAAAA GTCCGGCAGA ATTTGATATT TCTAAATATT TAAAACCAGG AAAAAACAAT
CTGGCTGTAG AAGTGTACAG ATGGAGCGAT GGTTCATATC TGGAAGATCA GGATATGTGG
AGACTTTCAG GAATTGATAG AAATGTGTAT TTGTATAGTA CTGAAGATGT TCGTATTTCA
GACTTTTTTG CAAAACCAGA TTTAGATGCG AAGTATAAAA ATGGAAGTTT AAATGTGGAA
GTGAGTTTAA AAAATCTGAC TTCAAAAGCA ATAAACAATC AAAAATTAAT TGCAAAATTA
GTTGATGCTT CAGGGAAAAA TGTATTTACT AAAGAAATCA ATGTCAATTT TGAAGCATCA
AAAGTTCAGA CAATCAATTT TGCCCAGAAT ATATCAAGTC CGAAATTATG GAGCAGTGAA
ACACCGAATT TATACACTCT GCTTTTGACT TTAAAGAATC AAAAAGGAGA AATTATAGAG
ACGGTTTCAA CGCAAATCGG ATTTAGAAAA GTAGAATTAA AAGGCGGTCA GTTATTGGTA
AACGGAGTTA GATTGATGGT TCATGGCGTA AATATTCACG AGCATAATCC AGAAACGGGA
CATTATCAGG ATGAAGCAAC GATGATGAAA GACATCAAAA TGATGAAACA GCTGAATATC
AATTCTGTTC GCTGCAGTCA TTATCCCAAC AATATTCTAT GGGTAAAACT TTGTAATAAA
TACGGTTTGT TTTTGGTCGA TGAAGCCAAT ATAGAAAGCC ACGGAATGGG AGTAGAGGGA
CAGCCTTTAA AATGGATGAA TCCAAAAACG AATCCAGGCT ATCTTCCAGA ATGGAGAGAA
GCACATTTGG ACCGAATTTA CAGCCTTGTT GAAAGAGATA AAAATATGCC GTCTGTAATT
ATCTGGTCAT TAGGTAATGA AAGTGCTAAC GGACCGGTTT TTCATGAAGC ATACAAATGG
ATTAAAAAGA GAGACATTAC CAGATTGGTT CAGTTTGAAC AGGCAAAAGA AAACGAAAAC
ACAGATATCG TCTGCCCAAT GTATCCAACG ATTGAATACA TGAAAGAATA TGCGGCAAGA
AAAGAAGTGA GTCGCCCGTA TATTATGTGT GAGTATTCGC ATGCTATGGG GAACAGCAGC
GGTAATTTTC AGGAATACTG GGATATCATT CGCGGAAGCA AAAATATGCA GGGCGGTTTT
ATCTGGGACT GGGTAGATCA GGGTTTTCAA GGAATTGACG AAGCGGGCCG TAAATATTGG
ACGTATGGCG GTGATATGGG AAGCCAGAAT TATCTAAACG ATGAAAACTT CTGCCACAAC
GGATTGGTTT ATCCAGATAG AACACCGCAT CCTGGAGCAT TTGAAGTAAA AAAAGTATAT
CAGAATATTT TGTTCAAAGC AGTTGATATC AAAAATGGTG TAATCGAAAT TAATAATGAT
TTTGGATTTA CAAACCTGAA TAAATACAAT TTCAGATACG AAGTTTTAGA GAACGGAAAA
GTAATTAAAG AAGGAACTTT TAATGTTGTT TTAGATCCAA AAACGAAAAA ACAATTCAAA
CTTGATTTAC CAAAATTGCA GTCAAAAGCA GGAACGGAAT ATTTACTGAA TGTTTTCGCT
CACACTAAAA CAGGATCTGA ATTATTGCCA CAAAACTTCG AAATCGCCAA AGAACAATTT
GTAATCGAAG ACGATAAGTA TTTCGAAAAA TCTGAAAAAG TAAATACTGC AAAAGTTCAG
GACGAGAAAG ATCAGTTTGT TTTGACTTCG GATAATGTTA CGGTTAAAAT CAGCAAGTCA
ACTGGATTGA TTTCGTATTA CAGTTTAAAA GGCGAAGAAT ATTTCAAACA ATATCCTGAA
CCTAATTTCT GGAGAGCGCC AACCGATAAT GATATTGGAA ATAAAATGCA GATTAGAACC
AATGTATGGA GAACGGCTGG AAAAAATACC TCTTTAGAAA GTATTCAGCA GACAGAAGAA
AACGGTCAGA AATATATCGT TGCAAAATTA AAATTAAGCG ATGTTGCTTC AGATTACACG
ATCAAATATG CATTGGCAAA TGATGGAGCT TTAGAAATTC AGGCTTCGTA TAAAAAAGGT
GCTAATCCTG TTCCTGAACT ACCGCGTTTT GGAATGATTT TCACTTTGAA AAATACATTA
GAGAATCTGG ATTATTACGG AAGAGGACCT TTAGAAAATT ATCCGGACAG AAAAACATCA
TCTTTAAAAG GAATTTATAG CAGTAAAGTT GCAGACCAAT ATGTGCCTTA TACACGCCCT
CAGGAAAATG GATACAAGAC CGATATACGC TGGTTCAAAT TATCAGGCAA TTCAGGAAAT
GGCTTGGAAA TAAAAGGTCT GCAGCCTTTA GCTATGAGTA CTTTGAATAA TTATCCAAGC
GATTTTGACG GAGGAATTTC GAAAAAGAAT ATTCATTCCA GTGATATTAC ACCAAGAAAT
GAAGTTGTGG TCTGTGTCGA CTTAACGCAA CGCGGACTTG GCGGCGATAA CAGCTGGGGA
TTACCGCCGC ATGAACAGTA TGTATTAACA AAGAGTGAAT ACAGCTATGG ATTTGTCATT
AAACCACTTT AA
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| Protein sequence | MQKTKIFFIS LLLLFSAGIW AQEKDRNDWE NPEVFQINRE PARAAFLPYA DETSAIMDKY
ENSPWYFSLN GTWKFSWSQT PDERPKDFYK TDFSTLHWKD LQVPSNWELH GYGVPIYTNI
TYPFEKNPPF INHWDNPVGS YKRDFVLPEN WKNRHVFLHF EAGTAAMYIW VNGEKVGYTE
NTKSPAEFDI SKYLKPGKNN LAVEVYRWSD GSYLEDQDMW RLSGIDRNVY LYSTEDVRIS
DFFAKPDLDA KYKNGSLNVE VSLKNLTSKA INNQKLIAKL VDASGKNVFT KEINVNFEAS
KVQTINFAQN ISSPKLWSSE TPNLYTLLLT LKNQKGEIIE TVSTQIGFRK VELKGGQLLV
NGVRLMVHGV NIHEHNPETG HYQDEATMMK DIKMMKQLNI NSVRCSHYPN NILWVKLCNK
YGLFLVDEAN IESHGMGVEG QPLKWMNPKT NPGYLPEWRE AHLDRIYSLV ERDKNMPSVI
IWSLGNESAN GPVFHEAYKW IKKRDITRLV QFEQAKENEN TDIVCPMYPT IEYMKEYAAR
KEVSRPYIMC EYSHAMGNSS GNFQEYWDII RGSKNMQGGF IWDWVDQGFQ GIDEAGRKYW
TYGGDMGSQN YLNDENFCHN GLVYPDRTPH PGAFEVKKVY QNILFKAVDI KNGVIEINND
FGFTNLNKYN FRYEVLENGK VIKEGTFNVV LDPKTKKQFK LDLPKLQSKA GTEYLLNVFA
HTKTGSELLP QNFEIAKEQF VIEDDKYFEK SEKVNTAKVQ DEKDQFVLTS DNVTVKISKS
TGLISYYSLK GEEYFKQYPE PNFWRAPTDN DIGNKMQIRT NVWRTAGKNT SLESIQQTEE
NGQKYIVAKL KLSDVASDYT IKYALANDGA LEIQASYKKG ANPVPELPRF GMIFTLKNTL
ENLDYYGRGP LENYPDRKTS SLKGIYSSKV ADQYVPYTRP QENGYKTDIR WFKLSGNSGN
GLEIKGLQPL AMSTLNNYPS DFDGGISKKN IHSSDITPRN EVVVCVDLTQ RGLGGDNSWG
LPPHEQYVLT KSEYSYGFVI KPL
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