| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3112 |
|---|
| Symbol | |
|---|
| ID | 5093108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3683032 |
|---|
| End bp | 3685500 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644742540 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001195448 |
|---|
| Protein GI | 146300857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.31763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCATA ATTTTTTAAG AAAGGGTTTT GTTTTTATTT CTGTAATTGC CGGATTTTCT
GGTTACGCGC AGGATTTAAA ACTGCAATAC AATCAGCCTG CGGTTGAATG GACAGAAGCT
CTGCCAATTG GAAACGGAAC GCTTGGCGCA ATGGTTTTTG GTCGCGTAGA TTCAGAATTA
ATTCAATTAA ACGAAGCGAC TTTATGGAGC GGCGGACCTG TTCAGAAAAA TGTAAATCCA
AATGCATTTC AAAATCTGGC TCTAATTAGA GAAGCCCTTA AAGCGGAAGA TTTTGACAAA
GCTTATAATC TGACCAAAAA TATGCAGGGC GCTTATAGTG AAAGTTTTAT GCCTTTGGGA
GATCTTTTAC TAACGCAGGA TTTAGGCAGC AAAAAAACGG ATTTTTACAA TAGAAGTCTG
GACATTCAAA CTGGATTAGC AGTGACTAAT TTTAAAGCCG ACGGCGTAAA TTATAAAAGA
GAAATCTTTG CATCGGCGCC TGCGAAATGT ATTGTAATGA AACTTTCGGC AGACCAGCTG
AAAAAACTTT CGGTTTCAAT TGACGCTTCC AGTCTTTTAA AAAATCAAAA AGAAATACAA
AATCAGTCAT TGGTTTTAAA AGGAAAAGCG CCTTCACATG CCGATCCGAA TTATATTGAT
TACAATAAAG AGCCTGTTAT TTATGACGAT CCAGCTGGAT GCCGCGGAAT GCGTTTTGAA
TTAATCGTAA AACCAATTGT AAAAGACGGA ACGGTAAGTT ATGAAGGAAA CAAAATAGTG
ATTAAAAATG CTTCAGAAAT AGTACTTTTT ATCTCGGCTG CAACCAGTTT CAACGGATTT
GATAAATGTC CCGACAGTCA GGGAAAAGAC GAACATGCTT TTGCTGAAAA CCCAATTAAA
AAAGCATCAG TCAAAAAATA TGATATTTTA GTTAAAGAAC ATCTTCAGGA TTTTCAAAAA
TTCTTCAATA GAGTTTCTTT ACAATTGAAT GAAAAAGAAA CCCATAAATC CAATCTTCCA
ACTGATATTC GTTTGGAACA ATATGCCAAA GGAGAAAAAG ATGCTGGATT AGAAGCTTTA
TTTTTTCAAT ACGGACGTTA TTTATTGATT TCTTCATCGC GTACACACAA CGCACCAGCC
AATTTACAGG GAATCTGGAA CAATAAATTG CGTGCGCCGT GGAGCAGTAA TTATACAACC
AATATCAATT TGCAGATGAA TTATTGGCCT GTTGAATCGG CAAGTTTATC AGAATTGTTT
TTTCCGCTTG ACGATTTTGT AAAAAATGTT TCTGTAACAG GAGCCGAAAC TGCCAAAAGT
TATTATCATG CCAACGGCTG GGTTTTGCAT CATAACTCAG ACATCTGGGC AACGACAAAT
CCTGTCGGCG ATTTTGGAAA AGGAGATCCA ATGTGGGCCA ACTGGTATAT GGGAGCTAAC
TGGTTAAGCA GACATTTATG GGAACATTAT CAATATACAG GCGACACAGA ATATCTTAAA
AAAGTATATC CAATTATAAA AGGCGCCGCA GAATTTAGTT TAGACTGGTT GCAACAAGAC
AAAAACGGCT ATTTAGTTAC GATGCCATCG ACTTCTCCAG AAAATAAATA TTTCTATGAC
GGAAAAAAAG GAGGCGTAGT AACAACGGCT TCTACAATGG ATATTGGCAT TATAAAAGAT
TTGTTTGAAA ATACGAGTCA AGCTTCTAAA ATTCTAAATA TCGACGCTGA TTTTAGACAG
AAAGTTGATA AAGCAGCCAA TCAATTATTA CCTTTTCAGA TAGGCGCAAA AGGACAGCTT
CAGGAATGGT ATAAAGATTT TGAAGACGAA GACCCGCATC ACAGACATAC CTCGCATTTG
TATGCCTTGC ATCCTGCTAA TTTAATTTCA CCTTTAAACA CACCAGAATT AGCCGCAGCA
GCTAAGAAAA CTTTAGAATT AAGAGGAGAC GACGGAACAG GCTGGAGTCT GGCATGGAAA
GTAAATATGT GGGCGAGACT TTTGGACGGA AATCATGCTT ATAAGTTATT CAAGAATCAG
CTGCGATTGA CAAAAGATAA TGATCCAAAA TACAAACGAC AAGGAGGCTG TTATCCCAAT
CTTTTTGATG CGCATCCGCC ATTTCAGATC GATGGCAATT TTGCTGGAAC GGCAGGAGTA
ATCGAGATGC TGATGCAGAG TCAGAACAAT GAAATTCATT TGCTTCCTGC TTTACCAGAC
GATTGGAAAG AAGGCGAAAT TAAAGGAATT ACGGCAAAAG GAAATTTCAC TGTAAATATA
AAATGGAACG ACGGAAAAAT GAGCCAGACT AAAATCGTAT CGAATAATGG AGGAACTTGT
AAAATAAGAT CTTCGGAACC TTTTGTAATT GAAAAACTGA ATATCAAAAG CGAGAAATCA
TCTATTGGAT ATACGGCTGT ATTTGAGACC AAAAAAGGCA CATCTTACAT CATAAATCCT
CTTCAATAA
|
|---|
| Protein sequence | MLHNFLRKGF VFISVIAGFS GYAQDLKLQY NQPAVEWTEA LPIGNGTLGA MVFGRVDSEL
IQLNEATLWS GGPVQKNVNP NAFQNLALIR EALKAEDFDK AYNLTKNMQG AYSESFMPLG
DLLLTQDLGS KKTDFYNRSL DIQTGLAVTN FKADGVNYKR EIFASAPAKC IVMKLSADQL
KKLSVSIDAS SLLKNQKEIQ NQSLVLKGKA PSHADPNYID YNKEPVIYDD PAGCRGMRFE
LIVKPIVKDG TVSYEGNKIV IKNASEIVLF ISAATSFNGF DKCPDSQGKD EHAFAENPIK
KASVKKYDIL VKEHLQDFQK FFNRVSLQLN EKETHKSNLP TDIRLEQYAK GEKDAGLEAL
FFQYGRYLLI SSSRTHNAPA NLQGIWNNKL RAPWSSNYTT NINLQMNYWP VESASLSELF
FPLDDFVKNV SVTGAETAKS YYHANGWVLH HNSDIWATTN PVGDFGKGDP MWANWYMGAN
WLSRHLWEHY QYTGDTEYLK KVYPIIKGAA EFSLDWLQQD KNGYLVTMPS TSPENKYFYD
GKKGGVVTTA STMDIGIIKD LFENTSQASK ILNIDADFRQ KVDKAANQLL PFQIGAKGQL
QEWYKDFEDE DPHHRHTSHL YALHPANLIS PLNTPELAAA AKKTLELRGD DGTGWSLAWK
VNMWARLLDG NHAYKLFKNQ LRLTKDNDPK YKRQGGCYPN LFDAHPPFQI DGNFAGTAGV
IEMLMQSQNN EIHLLPALPD DWKEGEIKGI TAKGNFTVNI KWNDGKMSQT KIVSNNGGTC
KIRSSEPFVI EKLNIKSEKS SIGYTAVFET KKGTSYIINP LQ
|
|---|
| |