| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3111 |
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| Symbol | |
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| ID | 5093107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3680580 |
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| End bp | 3683000 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644742539 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001195447 |
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| Protein GI | 146300856 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.634657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTAAAA ATAAGATCTT ACTGCCCGTA CTTTTTCTTT CGTGTTTTTC TGCATTTGCT
CAAATCTCGT TTGGAGATGC AAAGAAAATA AATGACAATT GGAAGTTTAA CCTTCAGGAT
GTTTCTGATG CTAAAAACGT CACTTTTGAC GACAGCAAAT GGAAACAAGT AAACGTACCG
CACGACTGGA GTGTAAAAGG ACAATTGAGC CCGACTTTGG CAAGCTGTAC AGGTTATCTG
CCAGGAGGAA TTGCGTGGTA CAGAAAATCC ATAAATATTC CGCAGAGCAA AGCAGGCGAA
AAAGTGTATT TGTATTTTGA AGGCGTTTAC AATAGAAGCG AAGTTTTCAT CAACGGGCAT
TCGTTAGGAA AACGTCCAAA CGGATATATT TCGTTTGCTT ATGATGCTAC AGAATTCGTG
AAATTTGGAA ACGAAAACAC TATTTCGGTT CGTGTAGATC ATAGTCAAAG CGCCGATTCA
CGATGGTACA GCGGTTCTGG AATTTACAGA AATGTCTGGT TGGTTTATGC AAATCCGATT
CATATTGCAC AATGGGGCGT TTATGCCTAT CCGGAAGTAC AAAATGGAAA TGGAGTTTTG
AATGTTGAAG TAGAGGTAGA AAATAATGTT GCATCAAAAA CGGCTTTAAC CGTTGTAAAT
GAATTATTTT TTAAAGGAAA ATCCATTGCA AAATCTTCTT CAAAAACAAC CATTTTTGCT
AATACTAAAG GAAAAATTGC AGCAAAAATT AACGTTAAGA ACCCGAAGTT ATGGGATTTA
GAAAATCCGA ATTTGTATCA GCTGAAAACT ACGGTTTTAC AAAACGGAAA AGAAATCGAT
AAAACGGAAA CACAGACTGG TTTTAGAAGT TTTACGTTCG ATGCCAATAA TGGTTTTGCC
CTTAACGGAA AATGGATGAA AATGAAAGGC GTTTGCCTGC ATCACGATGC CGGTGTTTTA
GGATCGGCAG TTCCAAGAGA AGTTTGGAAA ACCAGATTAG GAACGTTAAA AGAAATCGGA
GTAAATGCCA TTCGTACCAG TCATAATCCG CAGGCGCCGG ATTTCTATGA ACTTTGTGAT
GAATTAGGTT TATTGGTTTT GAATGAAGCT TATGACGAAT GGGAATTCCC AAAACGCAAA
TGGTTGCAAG GCTGGAATTA CGGTACGCCG GGTTACGAAG GTTCGTTTGA TATTTTTGCC
GATTGGGCAG AAAAGGATTT GGAAGATTTT GTGCGACGCG ACAGAAACCA TGTTTCGGTT
TTTGCATGGA GTATTGGCAA CGAAGTAGAT TATCCAAACG ATCCGTATTC GCATCCCGTT
TTAGACAAAG GAAAAGACGG TTTTGGACAG GCAACTTATG GCGGTTACAA AAAAGATGCT
CCCGATGCGA TGCGTCTTGG AGCAATTGCC AAACGTTTGG TTGCAGCAGT TAAGAAATAT
GATAAATCAC GTCCGACAAC GGCAGGTTTG GCTGGAGTAG CCATGTCTAA TGAAACAGAA
TATCCGGGAG CTTTGGATAT TACAGGATAC AATTATACAG AAAGTAAATA CCAATCAGAC
CACGAAAAAT ATCCAAACCG AGTTATCTAC GGAAGTGAAA ACACACACGA CATGCAGCCT
TGGCTTTCGG TTAAAAACAA CAAACATATT TTTGGGCAGT TTTTATGGAC AGGAATTGAT
TATCTGGGAG AATCGGGAAG ATGGCCCTCT AGAGGATTTT ATTCTGGTTT AGTTGATTTT
GCAGGCGTTA TCAAACCGCG AGGGTATTTC CGCCAATCTT TATGGTCAGA TAAACCGATG
ATTTATTTGG GAACTTATCC GCTTGTAAAT GAAAAAGATA TTTCTAAAGA TGCCTGGTCA
ATCTGGAATT ACGAAGAAGG ACAAAAAATA CGCGTGGTTT GTTATACCAA TGCCTCAAAA
GCACGTTTAG AATTGAATGG AAAAGTAGTC GGCGAAACGA AATTATATGA TGAAAAAACC
GGCATACTGT ATTGGGATAT TCCCTTTACA TCTGGAAAAT TAGAAGCAGT TGGATTGGAT
AAAAATGATA AAGAAGTAAG CCGTTATGGG ATTAATTCAA CACAACAGCC TTTTGAATTA
ACGATTGCAG ATAAAAATAG TACCATCAGC AAAGATAAAG GGGTTGCGAA AATCATGGTT
CAGGTAAAAG ACCAAAACGG ACTTCCGGTT ATGCTTTCAG ACAATGAAGT AACTTGTACG
ATTTCAGGTT CTGGAACTTT ATTAGGTTTA GAAGCTGGAA ACAACAGTGA TATGACCGAT
TATACAGATA ATGTTCAAAG AGTTTTTCAC GGACATATTG CGGCTTATAT TCAGGCTAAT
GGAGATTCGA CAGAGCCTAT AAAAGTAAAA TTTACGAGTC AATGGTTAAA ACCTGTAGAA
GTTACTATTA ATGTCAAATA A
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| Protein sequence | MFKNKILLPV LFLSCFSAFA QISFGDAKKI NDNWKFNLQD VSDAKNVTFD DSKWKQVNVP
HDWSVKGQLS PTLASCTGYL PGGIAWYRKS INIPQSKAGE KVYLYFEGVY NRSEVFINGH
SLGKRPNGYI SFAYDATEFV KFGNENTISV RVDHSQSADS RWYSGSGIYR NVWLVYANPI
HIAQWGVYAY PEVQNGNGVL NVEVEVENNV ASKTALTVVN ELFFKGKSIA KSSSKTTIFA
NTKGKIAAKI NVKNPKLWDL ENPNLYQLKT TVLQNGKEID KTETQTGFRS FTFDANNGFA
LNGKWMKMKG VCLHHDAGVL GSAVPREVWK TRLGTLKEIG VNAIRTSHNP QAPDFYELCD
ELGLLVLNEA YDEWEFPKRK WLQGWNYGTP GYEGSFDIFA DWAEKDLEDF VRRDRNHVSV
FAWSIGNEVD YPNDPYSHPV LDKGKDGFGQ ATYGGYKKDA PDAMRLGAIA KRLVAAVKKY
DKSRPTTAGL AGVAMSNETE YPGALDITGY NYTESKYQSD HEKYPNRVIY GSENTHDMQP
WLSVKNNKHI FGQFLWTGID YLGESGRWPS RGFYSGLVDF AGVIKPRGYF RQSLWSDKPM
IYLGTYPLVN EKDISKDAWS IWNYEEGQKI RVVCYTNASK ARLELNGKVV GETKLYDEKT
GILYWDIPFT SGKLEAVGLD KNDKEVSRYG INSTQQPFEL TIADKNSTIS KDKGVAKIMV
QVKDQNGLPV MLSDNEVTCT ISGSGTLLGL EAGNNSDMTD YTDNVQRVFH GHIAAYIQAN
GDSTEPIKVK FTSQWLKPVE VTINVK
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