Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3093 |
Symbol | |
ID | 5093620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3661195 |
End bp | 3662013 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644742521 |
Product | cation efflux protein |
Protein accession | YP_001195429 |
Protein GI | 146300838 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGTAT TAAGATTAAA ATATAGTCTT ATGAAAAAAA GTATATATAA TATAAGAAAA ATGGATTGTC CCAGTGAGGA ACAATTAATA CGAATGAAGC TCGCTGGTTT AGAACAAATC AAACAGCTTG ATTTTGACAT TGCAAACAGA AGATTAAAGA TCTATCATAC GGACGACGAC ACTCTTATAA CAAATGCAAT TGATACTCTT AATCTGGACA GCACTCTGCT GGCATCAGAA CATACATCAG AACATGTAGA GACAAACAGT GACTCACAGC AAAGTAAGTT ATTATGGCAG GTTCTCATTG TAAACTTTTC ATTCTTTCTA ATAGAGATAA TTACAGGTTT TATATCCAAT TCGATGGGAT TGGTTGCCGA CAGTTTGGAT ATGTTCGCCG ATAGCATTGT ATATGGTTTA GCTCTGTTTG CTGTCGGGAG CACAGCTTCA AGAAAAGGAA GTGTAGCAAA AATAAGTGGT TATTTTCAGA TTGGTCTTGC AGTTTTGGGA CTTATTGAAG TTTTAAGAAG ATTTGTAGAC TCAGACCATA TTCCTGCATA CGGAACTATG ATAATAGTTT CATTATTTGC ACTTGTAGGT AATTCGTTAT GCCTTTACCT GCTTCAAAAA TCTAAAAGTA AAGAGGCACA TATGGAAGCT AGTATGATTT TTACTTCGAA TGATATTGTA ATTAATATGG GAGTCATAAT TGCTGGTATA TTAGTATACT TTACTAATTC AATGGTACCC GATCTTATTA TTGGTGTTTG TGTGTTTTTC ATAGTCGCTA GAGGAGCATT AAAAATATTA CAGTTATGA
|
Protein sequence | MQVLRLKYSL MKKSIYNIRK MDCPSEEQLI RMKLAGLEQI KQLDFDIANR RLKIYHTDDD TLITNAIDTL NLDSTLLASE HTSEHVETNS DSQQSKLLWQ VLIVNFSFFL IEIITGFISN SMGLVADSLD MFADSIVYGL ALFAVGSTAS RKGSVAKISG YFQIGLAVLG LIEVLRRFVD SDHIPAYGTM IIVSLFALVG NSLCLYLLQK SKSKEAHMEA SMIFTSNDIV INMGVIIAGI LVYFTNSMVP DLIIGVCVFF IVARGALKIL QL
|
| |