| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3072 |
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| Symbol | |
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| ID | 5093599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 3640520 |
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| End bp | 3641734 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644742500 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001195408 |
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| Protein GI | 146300817 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.569417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA AATTAATAAT TCGTACTATT TTGCTCATTG CAATGGTTTT TCCACTTCTA
TTTACAGCAT GTGCCCAAAA AGAAGAAAAA AAAACCAGTC AGGAAAAAGC TCAAACCTAT
ACCTGCCCCA TGCATCCGCA AATTGTAAAA GATGGCCCCG GCTCATGCCC GATCTGTGGA
ATGGATTTAG TGCCTTTCGA AAAAAACAAC GCACAGGACT TTCTAACCTT GGGACCGAGC
CAGCAGGCAC TAGCTAATCT GACTACAATA ACTGCTGGGG AAAATGAATT TTCAAATTCT
TCTCATCTTA ACGGACGTTT GGTTACTGAC CCTGAGCAAA CTATTTACAT TTCAAGTCGC
GTGGCAGGAA GGATTGAAGA GTTGTATGTA AAAGAAACTG GTGTTCCCGT TCGAAAAGGC
CAGCCTTTGT ACAAAATATA TTCAGAGCAG CTTTCAGCCC TGCAGCAGGA GTACCTTCTA
GCTACGGCAC AGGCTGCAAG CTTTACTGAG GATAAACGAT TTGCCCAAAT AAAAAATGCT
GCAAAACAAA AACTATTATT ATATGGACAA TCTGAAGCAC AGCTTAATGA ATTATTAAAA
AAACAAAAAG CTTCTCCTTA TGTTGTTTAT TATGCCCCGT ATTCAGGAAT AGTTGCAGAA
CTTTCCATAA CAGAAGGCCA ATATGTAGCA GAAGGAGGCT CTATTATGAA ACTGGAAGAT
TATACCCGTT TATGGGTCGA AGCTGATGTC TATCCTGCAG ATGCCGGTAA AGTTAAAATA
GGCCAAAAAG TAAAAGTTAT TGTCTCGGGT TATGAAGATC AGCCCCAAAC AATGACGGTA
GATTTTATAA ATCCTGCCCT GCAGACAAGC AAACAGCTCA TACAGCTGCG AGGTGCTATT
GCCAATCCAA ACAAGCAATG GCAGGCAGGT CAACAGGCAA TTGTTTTACT GCCTTCATCA
GAACAAAAAA TGAAATTAAC CATACCTGTA GATGCCGTAA TAAGAGACGG CAGCGGTACA
CATGTGTGGA TTGAAATTGA AAAAGGCAAG TATCAGCCTA AAATGGTGGC TATTGGTTCT
GAAACCTTCG ATGAAGTGGA AATTACTAGC GGTTTAAAAA AAGGAGATAT CGTCGTTGCA
TCCGGTGCCT ATCTTTTGTA CAGTGAATTT ATATTAAAGA AAGGCAAAAA CCCTATGTCA
GGAATGAAAA TGTAA
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| Protein sequence | MNNKLIIRTI LLIAMVFPLL FTACAQKEEK KTSQEKAQTY TCPMHPQIVK DGPGSCPICG
MDLVPFEKNN AQDFLTLGPS QQALANLTTI TAGENEFSNS SHLNGRLVTD PEQTIYISSR
VAGRIEELYV KETGVPVRKG QPLYKIYSEQ LSALQQEYLL ATAQAASFTE DKRFAQIKNA
AKQKLLLYGQ SEAQLNELLK KQKASPYVVY YAPYSGIVAE LSITEGQYVA EGGSIMKLED
YTRLWVEADV YPADAGKVKI GQKVKVIVSG YEDQPQTMTV DFINPALQTS KQLIQLRGAI
ANPNKQWQAG QQAIVLLPSS EQKMKLTIPV DAVIRDGSGT HVWIEIEKGK YQPKMVAIGS
ETFDEVEITS GLKKGDIVVA SGAYLLYSEF ILKKGKNPMS GMKM
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