| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2965 |
|---|
| Symbol | |
|---|
| ID | 5091581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3515460 |
|---|
| End bp | 3515987 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 644742396 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001195305 |
|---|
| Protein GI | 146300714 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCTA AAGAACGAAT TTTAGAAAAG ACTTTTACTT TATTTCACAA ACAAGGTTAT
AATGCTACGG GAATCAATCA GATTATTGAA GAAGCGAAAG TAGCCAAAGC AAGCTTTTAT
CAACATTTTA AATCAAAAGA AGATTTATGT GTGGCTTTTT TGAATCAGCG TCATTCTTTT
TGGTTTGATG AACTGGAGAA ATTTACTTTA AATGCAGAAG ACTTAAATTC TAAAGTTTTA
AGCTCTTTTG ACTTTTTAAT TTTCATGAAT GCAAAAGAAA ATTTTAGAGG ATGCAGTTTT
CTTAATATAC TTTCTGAAAT TCCGCCTGAT AATAGTAAAA TACGCAGCGT TATTCAAAGT
CATAAAAGTG ATTTGCGGAA TTATTTTAGG GAAATTTTAA AAGAGGAACA ACTATCAGAT
CATGTGTATT TATTATTTGA AAGCTGTATA ATAGAAAGTC AGTTGTTTAA ATCAAACGAG
TTAATAGAAC AGTCAAAAAA AATAATTCAA ACTTTAATTT TAAAATAA
|
|---|
| Protein sequence | MLPKERILEK TFTLFHKQGY NATGINQIIE EAKVAKASFY QHFKSKEDLC VAFLNQRHSF
WFDELEKFTL NAEDLNSKVL SSFDFLIFMN AKENFRGCSF LNILSEIPPD NSKIRSVIQS
HKSDLRNYFR EILKEEQLSD HVYLLFESCI IESQLFKSNE LIEQSKKIIQ TLILK
|
|---|
| |