Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2962 |
Symbol | |
ID | 5091578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3512460 |
End bp | 3514184 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644742393 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_001195302 |
Protein GI | 146300711 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.324391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCTAT TTGACTGGAT CGTACTTATT GTAACCCTTT TATTCATTGT TGGATATGGT TCATGGAAAA CCAAAGGAAG CAAAAACGTT GAAGACTTTA TTTTAGGAAA CAACGAAACT CCGTGGTACA CCGTTGGACT TTCTGTAATG GCAACACAGG CCAGCGCCAT TACTTTTTTG TCTACACCGG GACAGGCTTA TCACGACGGA ATGGGATTTG TTCAATTCTA TTTCGGACTT CCAATTGCCA TGATTGTGAT TTGTTTGACA TTTATTCCGC TTTATCACAA ATACAAAGTA TTTACTGCCT ATGAATTTCT CGAAAAACGA TTTGATGTAA AAACACGTTC GCTTGCCGCT ATCCTGTTTT TAGTACAACG AGGATTAGGA ACCGGACTTA CCATTTATGC CCCTGCCATT ATTTTGTCGG CACTTTTGGG CTGGAACCTT ACCGTTATGA ATATCATAAT TGGGGTAATG GTAATTATTT ATACGTTTTC TGGAGGAACC AAAGCCGTAA ACGTTACGCA GAAACAGCAG ATGTTTGTAA TCATGTCGGG AATGTTTATC ACCTTTTTCC TGATTCTGCA TTATCTGCCA AACGATATGA CTTTTACAAG TGCTTTGCAT ATTGCTGGTG CAAACGATAA AATGAATATT GTGGATTTCT CTTTTGATCC AGAAGAAAAA TATACTTTTT GGAGCGGTAT TACCGGAGGA TTTTTCTTAG CCCTCGCCTA TTTTGGTACA GATCAGTCGC AGGTTGGAAG ATATTTATCA GGAAAATCAG TTGCTGAAAG CCAGATGGGA TTAATCATGA ACGGACTTTT AAAAGTTCCA ATGCAGTTTT TCATACTTCT TACCGGAGTA ATGGTATTTG TGTTTTTTCA GTTCAATCCA GTTCCGTTAA ATTTTAATCC GAACAATAAA GTTGTAATCG AAAAATCAGC TTATAAAGAA GAATACCATG CTTTAGAAAA AAAACTAAGC AAACTTTCTG AAGATAAAAA AGTAATTAAT CTGCTGTATA TCGATCAGTT AAATCAGGAT TACGATAATC CGATTCTGAG AAAAGAATTA GTGAATTTGT CGAATAAAGA AAAAGATTTA CGCGACCGCG CCAAAGAAAT CATTTCAAGA GCCGACAGCA ACAGCGAAAC GAATGATAAA GATTATGTCT TTTTCCATTT CATTCTGCAT TATTTACCAA AAGGATTAAT TGGTTTACTG CTTGCCGTGA TTCTTTCAGC TGCCATGTCA TCAACAGCTT CCGGATTAAA CGCTTTGGCT TCTACAACCG CAATCGACAT TTACAAAAGA AACCTCAAAA CCGAAAAATC AGAGAAACAT TATCTTCATG CAACTAAATT TTTTACTTTA TTTTGGGGAG TTGTAGCAAT ACTTTTTGCT TGTGTGGGAA CTTTGTTTGA GAATTTAATT CAGCTTGTAA ACATCATTGG ATCTATCTTT TACGGAACAG TTCTGGGAAT CTTCCTTGTT GGTTTTTATT TAAAAAGAGT TCAGGCAAAA CCAATGTTTA TCAGCGCTAT TATTAGTCAG TTAACCATTT TTGTAATTTA TTATTACATG ATTTACAGTC AGGAAAAATT AGGCTATTTA TGGCTGAATT TCATTGGTGC GATTTTAACT ATTGTATTGT CGCTTTTATT GCAATTCTTA TTTTTTAAAG GAAAACCAAA TGATGAAGAG CTGGTATTAG AATAA
|
Protein sequence | MQLFDWIVLI VTLLFIVGYG SWKTKGSKNV EDFILGNNET PWYTVGLSVM ATQASAITFL STPGQAYHDG MGFVQFYFGL PIAMIVICLT FIPLYHKYKV FTAYEFLEKR FDVKTRSLAA ILFLVQRGLG TGLTIYAPAI ILSALLGWNL TVMNIIIGVM VIIYTFSGGT KAVNVTQKQQ MFVIMSGMFI TFFLILHYLP NDMTFTSALH IAGANDKMNI VDFSFDPEEK YTFWSGITGG FFLALAYFGT DQSQVGRYLS GKSVAESQMG LIMNGLLKVP MQFFILLTGV MVFVFFQFNP VPLNFNPNNK VVIEKSAYKE EYHALEKKLS KLSEDKKVIN LLYIDQLNQD YDNPILRKEL VNLSNKEKDL RDRAKEIISR ADSNSETNDK DYVFFHFILH YLPKGLIGLL LAVILSAAMS STASGLNALA STTAIDIYKR NLKTEKSEKH YLHATKFFTL FWGVVAILFA CVGTLFENLI QLVNIIGSIF YGTVLGIFLV GFYLKRVQAK PMFISAIISQ LTIFVIYYYM IYSQEKLGYL WLNFIGAILT IVLSLLLQFL FFKGKPNDEE LVLE
|
| |