Gene Fjoh_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2962 
Symbol 
ID5091578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3512460 
End bp3514184 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content35% 
IMG OID644742393 
ProductSSS family solute/sodium (Na+) symporter 
Protein accessionYP_001195302 
Protein GI146300711 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.324391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTAT TTGACTGGAT CGTACTTATT GTAACCCTTT TATTCATTGT TGGATATGGT 
TCATGGAAAA CCAAAGGAAG CAAAAACGTT GAAGACTTTA TTTTAGGAAA CAACGAAACT
CCGTGGTACA CCGTTGGACT TTCTGTAATG GCAACACAGG CCAGCGCCAT TACTTTTTTG
TCTACACCGG GACAGGCTTA TCACGACGGA ATGGGATTTG TTCAATTCTA TTTCGGACTT
CCAATTGCCA TGATTGTGAT TTGTTTGACA TTTATTCCGC TTTATCACAA ATACAAAGTA
TTTACTGCCT ATGAATTTCT CGAAAAACGA TTTGATGTAA AAACACGTTC GCTTGCCGCT
ATCCTGTTTT TAGTACAACG AGGATTAGGA ACCGGACTTA CCATTTATGC CCCTGCCATT
ATTTTGTCGG CACTTTTGGG CTGGAACCTT ACCGTTATGA ATATCATAAT TGGGGTAATG
GTAATTATTT ATACGTTTTC TGGAGGAACC AAAGCCGTAA ACGTTACGCA GAAACAGCAG
ATGTTTGTAA TCATGTCGGG AATGTTTATC ACCTTTTTCC TGATTCTGCA TTATCTGCCA
AACGATATGA CTTTTACAAG TGCTTTGCAT ATTGCTGGTG CAAACGATAA AATGAATATT
GTGGATTTCT CTTTTGATCC AGAAGAAAAA TATACTTTTT GGAGCGGTAT TACCGGAGGA
TTTTTCTTAG CCCTCGCCTA TTTTGGTACA GATCAGTCGC AGGTTGGAAG ATATTTATCA
GGAAAATCAG TTGCTGAAAG CCAGATGGGA TTAATCATGA ACGGACTTTT AAAAGTTCCA
ATGCAGTTTT TCATACTTCT TACCGGAGTA ATGGTATTTG TGTTTTTTCA GTTCAATCCA
GTTCCGTTAA ATTTTAATCC GAACAATAAA GTTGTAATCG AAAAATCAGC TTATAAAGAA
GAATACCATG CTTTAGAAAA AAAACTAAGC AAACTTTCTG AAGATAAAAA AGTAATTAAT
CTGCTGTATA TCGATCAGTT AAATCAGGAT TACGATAATC CGATTCTGAG AAAAGAATTA
GTGAATTTGT CGAATAAAGA AAAAGATTTA CGCGACCGCG CCAAAGAAAT CATTTCAAGA
GCCGACAGCA ACAGCGAAAC GAATGATAAA GATTATGTCT TTTTCCATTT CATTCTGCAT
TATTTACCAA AAGGATTAAT TGGTTTACTG CTTGCCGTGA TTCTTTCAGC TGCCATGTCA
TCAACAGCTT CCGGATTAAA CGCTTTGGCT TCTACAACCG CAATCGACAT TTACAAAAGA
AACCTCAAAA CCGAAAAATC AGAGAAACAT TATCTTCATG CAACTAAATT TTTTACTTTA
TTTTGGGGAG TTGTAGCAAT ACTTTTTGCT TGTGTGGGAA CTTTGTTTGA GAATTTAATT
CAGCTTGTAA ACATCATTGG ATCTATCTTT TACGGAACAG TTCTGGGAAT CTTCCTTGTT
GGTTTTTATT TAAAAAGAGT TCAGGCAAAA CCAATGTTTA TCAGCGCTAT TATTAGTCAG
TTAACCATTT TTGTAATTTA TTATTACATG ATTTACAGTC AGGAAAAATT AGGCTATTTA
TGGCTGAATT TCATTGGTGC GATTTTAACT ATTGTATTGT CGCTTTTATT GCAATTCTTA
TTTTTTAAAG GAAAACCAAA TGATGAAGAG CTGGTATTAG AATAA
 
Protein sequence
MQLFDWIVLI VTLLFIVGYG SWKTKGSKNV EDFILGNNET PWYTVGLSVM ATQASAITFL 
STPGQAYHDG MGFVQFYFGL PIAMIVICLT FIPLYHKYKV FTAYEFLEKR FDVKTRSLAA
ILFLVQRGLG TGLTIYAPAI ILSALLGWNL TVMNIIIGVM VIIYTFSGGT KAVNVTQKQQ
MFVIMSGMFI TFFLILHYLP NDMTFTSALH IAGANDKMNI VDFSFDPEEK YTFWSGITGG
FFLALAYFGT DQSQVGRYLS GKSVAESQMG LIMNGLLKVP MQFFILLTGV MVFVFFQFNP
VPLNFNPNNK VVIEKSAYKE EYHALEKKLS KLSEDKKVIN LLYIDQLNQD YDNPILRKEL
VNLSNKEKDL RDRAKEIISR ADSNSETNDK DYVFFHFILH YLPKGLIGLL LAVILSAAMS
STASGLNALA STTAIDIYKR NLKTEKSEKH YLHATKFFTL FWGVVAILFA CVGTLFENLI
QLVNIIGSIF YGTVLGIFLV GFYLKRVQAK PMFISAIISQ LTIFVIYYYM IYSQEKLGYL
WLNFIGAILT IVLSLLLQFL FFKGKPNDEE LVLE