Gene Fjoh_2953 details

Gene Information

• Locus tag: Fjoh_2953
• ID: 5091569
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 3501282
• End bp: 3501809
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 644742384
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_001195293
• Protein GI: 146300702
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.183089
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA GTTATAAAGA AATGATGAAC GACATTACAA CATTTATTTT TGATGTTGAT 
GGCGTACTTA CAGACAGTTC GGTTTTTGTA ACCACAGAAG GAGAAATTCT TCGTACGATG 
AATATTCGTG ACGGTTATGC CATGAAAGCG GCTGTAGAAA GCGGTTACAA TGTGTGCATT 
ATTTCTGGCG GCAGCAACGA AGGTGTCCGC GTAAGACTTC AAAATTTAGG AATTACTGAT 
ATTCATTTAG GAACTCCTGA TAAAGTTAAA ACATTTAAAG AGTATACAGA AGCGAACAAC 
ATCAAACCAG AACAGGTTTT ATATATGGGA GACGATATTC CGGATTATCA TGTAATGAAA 
TTAGTAGGTT TACCAGCTTC TCCTCAGGAT GCAGTTCCTG AAATTAAAAA CATCTGCCGT 
TATATTTCGC ACGTAAAAGG CGGAAAAGGC GCTGCAAGAG ACGTTATCGA ACAGGTGATG 
AAAGTACAGG GAAAATGGAT GGAATATTTT AACGGAAAAC ACGATTAA 

 

Protein sequence

MAKSYKEMMN DITTFIFDVD GVLTDSSVFV TTEGEILRTM NIRDGYAMKA AVESGYNVCI 
ISGGSNEGVR VRLQNLGITD IHLGTPDKVK TFKEYTEANN IKPEQVLYMG DDIPDYHVMK 
LVGLPASPQD AVPEIKNICR YISHVKGGKG AARDVIEQVM KVQGKWMEYF NGKHD