Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2939 |
Symbol | |
ID | 5091555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3482429 |
End bp | 3483487 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644742370 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001195279 |
Protein GI | 146300688 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0067677 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA AACATCTAAT CTACGCCTTG ATAATCATCG TTTTAGGAGG ATTTATTACG TATAGAATAA TATCCAACAA AGGAAAGAAC GACGAATCAA AAAAATTTGG CGACAAAGAC AAACCAACGA CAGTAACAGG ATTAGTAATT CAAACTACTA CTTTTGATAA TAATTTGTCA TTATCTGGTT CTATCGAAGC CAATGAACAA ATTGAAATTC ACAGCGAAGT TTCTGGAATT GTAGAAGGTA TTTATTTTAA TGAAGGAACT TATGTGAATA AAGGTCAGGT ACTTTTTAAA GTAAATGATA TCGAATTAAA AGCGCAGTTA AGACAAGCTG TAACTAAAGA AGGCTTAGCT GCAGAAAATG AAAGAAGAGC TAAACTTTTA CTTCAAAAAG AAGCCATCAG CCAGGAAGAA GCCGATGTTG CTAGAGCAGA CCATGCTTCT GCGCAGGCAC AAAGCCAATT AATAAGAGCA CAAATATCTA AAACATCTGT AAAAGCACCA TTTTCAGGAA AAATTGGTCT TCGTTCTATT TCACCTGGAA CTTATATTAC ACCAACTGTT TTGGTAGCAA AATTAGTAAA CACAGGAAAA TTAAAAATTA CATTCTCTAT TCCTGAAAAA TATGCTTCGC AGGTACAATC AGGATCTACT ATAGATTTTA CGGTTTCGGG TTCAAATAAA ACCTATACAG CAAAAATATA TGCCATAGAA CCAGAGGTAG CTGTTGCAAC CCGTACACTG CAGATTCGTG CTATTGCCGA CAATACCGAC GGAAAACTTT TCCCTGGAAC TTTTGCCGAC ATCAAATTAC CTTTAAACAT TATTAAAGAT GCTATAGTTG TTCCTTCTCA AGCTATTATT CCAATACAAG ACGGTAAAAA AGTTTTTATT GCTGATAATG GCAAAGCAAA GGAAGTTATG GTTGATGCTA CAACAAGAAC CGATTCTTCA ATTCTAATTT TATCAGGATT AAAAGCTGGA GATACTTTAA TCACAAGCGG TGTTATGTCA TTAAAAAACG AAGCACCAAT TAAAGTTAAA GTAAAATAG
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Protein sequence | MKLKHLIYAL IIIVLGGFIT YRIISNKGKN DESKKFGDKD KPTTVTGLVI QTTTFDNNLS LSGSIEANEQ IEIHSEVSGI VEGIYFNEGT YVNKGQVLFK VNDIELKAQL RQAVTKEGLA AENERRAKLL LQKEAISQEE ADVARADHAS AQAQSQLIRA QISKTSVKAP FSGKIGLRSI SPGTYITPTV LVAKLVNTGK LKITFSIPEK YASQVQSGST IDFTVSGSNK TYTAKIYAIE PEVAVATRTL QIRAIADNTD GKLFPGTFAD IKLPLNIIKD AIVVPSQAII PIQDGKKVFI ADNGKAKEVM VDATTRTDSS ILILSGLKAG DTLITSGVMS LKNEAPIKVK VK
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