Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2916 |
Symbol | |
ID | 5092736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3458407 |
End bp | 3460098 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742347 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001195256 |
Protein GI | 146300665 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0621526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGACG ATAAGAAAGT AATTTTCTCA ATGCAGAAAT TGAGTAAAAC CTATCAGGGA GCAGACAAAC CAGTACTTAA AAATATTTAT TTGAGTTTCT TTTACGGAGC TAAAATTGGT ATTTTAGGTC TTAACGGTTC TGGAAAATCT TCTCTTTTAA AAATTATTGC AGGTGTAGAT AAAAACTATC AAGGAGATGT TGTTTTTCAG CCAGGATATA CTGTTGGTTA TTTAGAGCAG GAACCAATTC TTGACGATTC TAAAACAGTT ATCGAAATTG TTCGTGAAGG TGCTGCAGAA ACTATGGCAG TTTTAGAAGA ATACAACCAA ATTAATGATT TATTCGGTCT TCCGGAATAT TACGAAGATC AGGATAAAAT GGATAAATTG ATGGACCGTC AAGCGGCATT GCAAGATAAA ATTGATGCGC TTGGTGCTTG GGAAATTGAT ACAAAATTAG AAATCGCAAT GGATGCACTG CGTACTCCAG AAGGAGATAC GCCAATTAAA AACCTTTCAG GAGGAGAGCG TCGTCGTGTT GCTTTATGTC GTTTGTTATT ACAGCAGCCA GATGTATTGC TTTTAGATGA GCCTACCAAC CACCTTGATG CTGAATCTGT ACTTTGGTTA GAGCAGCACT TGGCACAATA TTCTGGAACT GTAATTGCTG TAACGCACGA CCGTTATTTC CTTGATAATG TTGCAGGCTG GATTCTTGAA TTAGATAGAG GTGAAGGTAT TCCGTGGAAA GGAAACTATT CTTCTTGGTT AGATCAAAAA TCAAATCGTT TAGCTCAGGA AGAAAAAGTA GCTTCTAAAC GTAGAAAAAC TTTAGAGCGT GAGTTGGAAT GGGTTCGTCA AGGAGCTAAA GGTCGTCAGA CAAAACAAAA AGCGCGTTTA CAGAACTACG ACAAATTATT GAATGAGGAT CAAAAACAAC TAGATGAAAA ACTAGAAATC TATATTCCGA ATGGTCCGCG TTTAGGAACA AATGTTATTG AAGCTAAAAA TGTTGCCAAA GCTTTTGGCG ATAAATTATT ATATGATAAT TTGAACTTTA CTCTGCCGCA AGCTGGTATT GTTGGAATTA TTGGACCAAA CGGTGCTGGT AAATCTACTA TTTTCAAAAT GATTATGGGA GAACAAGCAA CAGACAGTGG AGAATTTTCT GTTGGTGATA CTGTAAAAAT TGCTTACGTA GATCAGTCTC ACTCAAACAT TGATCCTAAT AAATCTATTT GGGAAAACTT TGCAGATGGT CAGGAATTGA TTATGATGGG AGGGAAACAA GTAAACTCAA GAGCTTACTT ATCTCGTTTC AACTTTGGAG GTGGAGAACA AAACAAAAAA GTGTCAATGC TTTCTGGTGG AGAACGTAAC CGTTTACACT TAGCAATGAC ATTGAAAGAA GAAGGAAACG TACTTTTACT GGATGAGCCT ACAAATGACC TTGACGTAAA TACACTTCGT GCACTTGAAG AAGGTTTAGA GAATTTTGCG GGTTGTGCTG TAATTATTTC TCACGACAGA TGGTTCTTAG ATAGAATTTG TACACACATT CTAGCTTTTG AAGGAGATTC TGAAGTTTAT TTCTTCGAAG GAAGTTTTAC TGATTATGAA GAAAACAAAA AGAAACGTCT TGGCGGTGAT TTAACTCCAA AACGTTTGAA ATACAGAAAA TTGATTAGAT AA
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Protein sequence | MSDDKKVIFS MQKLSKTYQG ADKPVLKNIY LSFFYGAKIG ILGLNGSGKS SLLKIIAGVD KNYQGDVVFQ PGYTVGYLEQ EPILDDSKTV IEIVREGAAE TMAVLEEYNQ INDLFGLPEY YEDQDKMDKL MDRQAALQDK IDALGAWEID TKLEIAMDAL RTPEGDTPIK NLSGGERRRV ALCRLLLQQP DVLLLDEPTN HLDAESVLWL EQHLAQYSGT VIAVTHDRYF LDNVAGWILE LDRGEGIPWK GNYSSWLDQK SNRLAQEEKV ASKRRKTLER ELEWVRQGAK GRQTKQKARL QNYDKLLNED QKQLDEKLEI YIPNGPRLGT NVIEAKNVAK AFGDKLLYDN LNFTLPQAGI VGIIGPNGAG KSTIFKMIMG EQATDSGEFS VGDTVKIAYV DQSHSNIDPN KSIWENFADG QELIMMGGKQ VNSRAYLSRF NFGGGEQNKK VSMLSGGERN RLHLAMTLKE EGNVLLLDEP TNDLDVNTLR ALEEGLENFA GCAVIISHDR WFLDRICTHI LAFEGDSEVY FFEGSFTDYE ENKKKRLGGD LTPKRLKYRK LIR
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