Gene Fjoh_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2912 
Symbol 
ID5092732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp3454130 
End bp3454795 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content35% 
IMG OID644742343 
Producturacil-DNA glycosylase 
Protein accessionYP_001195252 
Protein GI146300661 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0496469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTAA AAATGCATTC TTCTTGGAAA CCAATTCTAA ATGAAGAATT TCAAAAACCA 
TATTTCAGCG AATTAATTTC TTTTGTAAAA TCAGAATATA CCACTAAGGT TTGTTATCCA 
AAGGGAAATC AGATTTTTTC TGCTTTTGAT CATTGTCATT TTGATGAAGT AAAAGTGGTT 
ATCATTGGGC AGGATCCTTA TCACGGACCA AATCAGGCAA ATGGTTTATG TTTTTCTGTA 
AATGACGGAA TTCCTTTTCC TCCTTCTTTG CATAATATTT TTAAAGAAAT CGAAACTGAT 
TTGGGTAAAC CAATGCCGTC AACCGGTAAT CTTGAGCGCT GGGCAGATCA GGGTGTATTT 
CTTTTAAATG CAACTTTAAC GGTTAGGCAG TCTGAAGCAG GAAGTCACCA GGGAAAAGGC 
TGGGAAAAAT TTACAGATGC TGTTATTAAA CAAATTTCTG CCGAAAAAGA AAATGTTGTT 
TTTCTTCTAT GGGGTGGATT TGCTCAAAAG AAAGCTGCTT TGATTGATTC ATCAAAACAT 
CATATTTTAA AATCCGGACA TCCTTCGCCT TTAAGTGCAA ACAGAGGTTT TTGGTTTGGA 
AACAAACATT TCAGCCAGAC AAATGATTTC TTGAAATCAA AAGGATTAAA ACAAATTGAA 
TGGTAA
 
Protein sequence
MDVKMHSSWK PILNEEFQKP YFSELISFVK SEYTTKVCYP KGNQIFSAFD HCHFDEVKVV 
IIGQDPYHGP NQANGLCFSV NDGIPFPPSL HNIFKEIETD LGKPMPSTGN LERWADQGVF 
LLNATLTVRQ SEAGSHQGKG WEKFTDAVIK QISAEKENVV FLLWGGFAQK KAALIDSSKH 
HILKSGHPSP LSANRGFWFG NKHFSQTNDF LKSKGLKQIE W