Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2904 |
Symbol | lpxD |
ID | 5092724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3446308 |
End bp | 3447351 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644742335 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001195244 |
Protein GI | 146300653 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0159169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA CAGCAGAACA AATAGCAGGA ATTTTAGAAG GAGAAGTTGT TGGGAATCCC AATGCAGAAG TTTCTCGACT TTCTAAGATA GAAGAAGGTG AGGAGGGATC TCTTACTTTT TTGGCTAATC CCAAATATAT CAATTACATA TATAGTACAA AAGCAACTGT TACAATTGTT AACGACAGCT TTATTCCTGA GCAGGAAATT ACTACTACTT TAATAAAAGT AGAAGATGCT TATGCAGCAT TTTCTAAACT TTTACACTTT TACAATCAGG TTAAATTAAA TAAAAACGGA ATCGAGCCGC AGTCATTTAT GTCTGAGGGA ACTAAATATG GAGAAAATCT ATATCTGGGA AGTTTTAGTT ACGTAGGGCA GAATGTCGTT TTGGGGGATA ATGTTAAAAT TTATCCTAAC AGCTTTATTG GAGATAATGT AACAATAGGT GATAATGTCT TTATTTTTGC CGGCGCAAAA ATTTATTCAG AAACTGTAAT TGGAAATAAT TGCACTATTC ATTCAGGTAC TATTATAGGT GCAGATGGTT TTGGTTTTGT ACCAAATGAA GAAGGGGTGT ACAGTAAAGT GCCACAGATT GGCAACGTTA TTATTGAAGA TAATGTAGAT ATTGGTGCAA ATACAACAAT AGACAGAGCA ACTCTTGGTT CTACAATTAT TAGACAAGGA GTTAAATTAG ACAATCAAAT TCAGGTCGCT CACAATGTTG AAATTGGTAA AAACACAGTA ATTGCAGCAC AAAGCGGCGT TGCGGGTTCT ACTAAAATTG GAGAAAACTG TATGATTGGA GGGCAGGTTG GTATCGCAGG CCACTTAACT ATTGGAAATA ATGTGAGACT TCAGGCACAG TCTGGAGTAG CAAGAAACAT TAAAGATGAC GAAGTTCTGC AGGGAACACC ATCTCTTGGA TATACTGATT TTAATAAATC GTATGTTCAC TTTAAAAATC TTCCTAAGAT AGTTGCCGAA GTTGAAGAAA TAAAAAAACA AATAATAAAC CCAAAAAATG GAAATAATGG TTAA
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Protein sequence | MKFTAEQIAG ILEGEVVGNP NAEVSRLSKI EEGEEGSLTF LANPKYINYI YSTKATVTIV NDSFIPEQEI TTTLIKVEDA YAAFSKLLHF YNQVKLNKNG IEPQSFMSEG TKYGENLYLG SFSYVGQNVV LGDNVKIYPN SFIGDNVTIG DNVFIFAGAK IYSETVIGNN CTIHSGTIIG ADGFGFVPNE EGVYSKVPQI GNVIIEDNVD IGANTTIDRA TLGSTIIRQG VKLDNQIQVA HNVEIGKNTV IAAQSGVAGS TKIGENCMIG GQVGIAGHLT IGNNVRLQAQ SGVARNIKDD EVLQGTPSLG YTDFNKSYVH FKNLPKIVAE VEEIKKQIIN PKNGNNG
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