Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2894 |
Symbol | |
ID | 5092714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3434212 |
End bp | 3437925 |
Gene Length | 3714 bp |
Protein Length | 1237 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644742325 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_001195234 |
Protein GI | 146300643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.403551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC CAGTTGTTAA ACAACGATTA CTCCATAGAA TCATGAAAAT AACACTATTT CAGTTTGTCT TGGCACTTGT GTTTTCGAGC TTTGCCGTGG CAAATAATGT AAATGGGCAA AAAAAATTAG ATACAAAAGT TACCATTATA GTTGAAAATT TGACTCTTGA TAATGCTTTA TCTAAAATTG AAAAATCGGC TCATGTAAAA TTTTCGTACA ATTCGAGGCT CCCTCAGTTA AGCCGAAAAG TTAGTATAGA AGCGAATCAG GAAACGCTTT CTAGCATACT AAGCCGAATT TTGGTGCCAT TTAATATTAC TTTTTCAGAA GTGAGCAATC AAATTATTCT GCAAAAAACC GCTGCAGATC CATTTGCAAG TGCAGATAAC CATGATTCAC TTTTTGAAGT ACTAACCGCC GGACCAATTA TCAAAGGTAA AGTAACAGAT CAAACAGGAA GCCCGCTTCC GGGAGCAACA GTAATGGCAA AAGGAACAAA AGTTGCTGTT CTAACAGACT TTGATGGAAA TTTCTCTATC GAAATGCCTG CAAATGCAGA TAAACTTGTA ATTTCTTACG TAGGTATGGA AACGAAAGAA ATTGGAATTA CTAATGTTAC ACCAACAGTT GTTCTTACAG AAGCAGGTCA AAACTTAAAA GAGGTTGTAG TTACAACAGG ATATGAGAAA ACATCTAAAA GAACATTTAC AGGAGCAATC AGTAAAATCT CTGGTTCAGA GTTAAAAGTT GAAGGTGTAG TTGACGTAAG CCGAATGATC GAAGGAAAAG CGGCAGGGGT TACAGTACAA AATGTTACAG GAACTTTTGG TACGGCTCCT AAAATTACCG TTCGTGGATC TTCTTCAATT TTTGGGGATA CAAAACCATT ATGGGTTATT GATGGTGTTG TTCAGGAAGA TATTATCAAT GTTACATTTG CAGATTTAGC TTCAGGAAAC TCTGCAACAT TATTAAGTTC TTCTGTTGCA GGTTTAAATT CTAATGATAT TCAAAGTATT GAAGTTCTTA AAGATGCATC GGCTACGTCA ATTTATGGTT CAAGATCATT AAACGGAGTT GTGGTTGTTA CTACAAAACA AGGACGAAGA GATTCACCAT TAAAAGTGAG CTATTCTGTA GAAAATACAG TTAGAACTGT ACCTAGTTAT TCACAATACG ATATCTTAAA CTCTCAGGAA TCTATGAGTG TTTTTCAGGA AATGAGACAA AAAGGATATC TTGATTTAAG TTCTTCATAT ACAGGAAGAT TTGGTGGTGT TTATAATATC TTGGCTAGAG AAATCAATAA TTATAATACT TCAAACGGTC AGTATGGAGT TAAAAATGAT CAGCCTTATA TCAATGAATT CTTGAAAAAA TATGAATTAG TAAATACAGA CTGGTTTAGT GTTTTATTTA GACCTTCTAT TACTCAAAAC CATTCATTAA GCTTTTCTGG AGGAGGAAAA AACAATACTT TTTATGCTTC TCTTGGATAC TATACAGATC CGGGATGGAC TATTGCTGAT AACGTAAAAC AATTGTCATC TAACCTTAAA GGTACATTTT TCATCAATGA CAAGTTAAAC ATTACTTTAT CTACTTTAGG ATCTATTCGT AACCAGCAGG CTCCTGGGGC TTATGAAAGC AAGCAGGATG TTGTATTTGG TAAAACAACA AGAGATTTTG ATATTAACCC ATTTAACTAT GTGTTAAGTA CAAGCAGAAC TTTAAGACCT TATGATGACA AAGGAAACTT AGAATACTAC CAAAACAACT GGGCTCCAAT GAACATTGTT AATGAGTTAG CAAATAATAC TTTAGATATT AAAGTAAATG ATATTCGTTT TCAGGTAGAT TTAGATTATA AAATAAATAA AAACTTGACT TATAATTTAA CTGGTTCTGC TCGTTATGCA AATACGTCAA GAGAACACAG AATTTATGAA GGTTCAAATG TTGTTGGAGC TTATAACGCT GGAGTTGGTA ATAATGTAAA TTCTCAGATT CAAAAAGATA ACGTGTTTTT ATATCAAAAT CCAAATGATT TAACAGCACC AAAAGTATCT GTACTGCCAA GTGGTGGATT TTTAAGAAAA TTCACAAATG ATATGACATC TTACAACATT AGAAATAGTG TTACTTATAG AAATATATTT AAAGACAAAC ACGAAGTTGA AGGTTTCTTT GGTACAGAGC TTAGATCTGT AGACAGAAAC AATGACAATT TTACGGCAGT TGGAATTCAG TACAATAAAG GTTTAACTCC ATTTATTGAT CCAAGAATTA TCGAAAAAAT CGTAAACGGA GGAGACTCAT ATTATGATTT TGGAGAAGAA AGAGAAAGAA CAGTTGGTTT CTTTGGTAAA GTTGGATATA CATACGATCG TCGTTATACA GCATCTTTAA CGGGTCGTTA TGATGGATCA AACAGACAAG GAGATACTGG ATCATCAAGA TGGCTTCCAA CTTATACTGT AAGTGGAAAA TGGAATGTTG CTGAAGAAAG CTTTATGAAA AACAATGAAA CTATCAATAC ATTAGCATTA AGAGCTTCTT ATGGACTTAC TGCTACAGCT GGTCCTGCAA CAAACTCTTT AGCAATTTAT AAAAGTTTTA TAACAGACCG TTTTAACCTT TCTGATAGAG AAAATGCTAT TAGAATTGAA GATCTTCAAA ACAAAGATTT GACATGGGAA AAACAATATG AAACTAACAT TGGTGTAGAT TTAGGAATGT TTAATAACAG AGTATCTCTT GCAGCAGATG TTTACAGACG TAAAGCTTTT GATTTGATTG ATTATGTAAT CACTTCTGGT GTAGGTGGAG AATCTATTAA ACAAGGAAAT AATGCCGATA TGGAAACTAA AGGTATTGAG CTTGGATTAA CTACTCAAAA TATTGTAACA GATAACTTTA AGTGGTCGAC AACTTTAAAT TTCTCAGTAT TTAATCAGGA AATTACAAAA TTAGCAAACA GACCATCTGC TTTTGATTTA GTTGATTCTA ATGGAGGTAA TACTGTAGGA CACCCTAGAA ATTCTATTTA TTCTTATCAA TTTACAGGAT TAAATAATCA GGGATTACCA ACATTTAATT TACAAGAAGG AGCAGAAAAT AACATTACAG GTGCTGATTT TCAAGATACC AAAGATGTTA CAAAATACTT GAAATATGAA GGTTCTATTG AGCCAAATAA ATCAATTGGT TTAGCAAATA CATTTACTTA TAAAAACTGG TCATTATATG TATTTGTTGT AGGTTCTGGA GGAAATAAAG TTCGTTTAAA CCCTGTTTAC AGTAACAAAT ACACTGATTT AACAGTATTT ACAAAAGAAT ACGCTAACCG CTGGATAAAC CCTGGTGATG AAAATGTTAC AAACGTTCCT GTTATTGCTG ATAGATTATT AAACAGAAAT TATGGAGAAA GAGATCTTGA AATTGCATAC AATACTTATA ACTTCTCTGA TGTAAGAATT GCTGATGGTG ATTTCGTGAG ATTGAAAAAT GTTACTTTAA GCTGGGAATT CCCAAAAGAT TACAAGAAAA AACTAGGCTT AAGTACTTTT ACATTAAAAG GTTCAGCAGT TAACCCATGG TTAATTTATT CAGATAAAAG ATTACACGGT CAGGATCCTG AGTTTCGTAA TACAGGAGGT GTTGCTTTCC CAATCACTTC TCAGTACACA TTTACGTTAA ATGTTTCATT CTAA
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Protein sequence | MKKPVVKQRL LHRIMKITLF QFVLALVFSS FAVANNVNGQ KKLDTKVTII VENLTLDNAL SKIEKSAHVK FSYNSRLPQL SRKVSIEANQ ETLSSILSRI LVPFNITFSE VSNQIILQKT AADPFASADN HDSLFEVLTA GPIIKGKVTD QTGSPLPGAT VMAKGTKVAV LTDFDGNFSI EMPANADKLV ISYVGMETKE IGITNVTPTV VLTEAGQNLK EVVVTTGYEK TSKRTFTGAI SKISGSELKV EGVVDVSRMI EGKAAGVTVQ NVTGTFGTAP KITVRGSSSI FGDTKPLWVI DGVVQEDIIN VTFADLASGN SATLLSSSVA GLNSNDIQSI EVLKDASATS IYGSRSLNGV VVVTTKQGRR DSPLKVSYSV ENTVRTVPSY SQYDILNSQE SMSVFQEMRQ KGYLDLSSSY TGRFGGVYNI LAREINNYNT SNGQYGVKND QPYINEFLKK YELVNTDWFS VLFRPSITQN HSLSFSGGGK NNTFYASLGY YTDPGWTIAD NVKQLSSNLK GTFFINDKLN ITLSTLGSIR NQQAPGAYES KQDVVFGKTT RDFDINPFNY VLSTSRTLRP YDDKGNLEYY QNNWAPMNIV NELANNTLDI KVNDIRFQVD LDYKINKNLT YNLTGSARYA NTSREHRIYE GSNVVGAYNA GVGNNVNSQI QKDNVFLYQN PNDLTAPKVS VLPSGGFLRK FTNDMTSYNI RNSVTYRNIF KDKHEVEGFF GTELRSVDRN NDNFTAVGIQ YNKGLTPFID PRIIEKIVNG GDSYYDFGEE RERTVGFFGK VGYTYDRRYT ASLTGRYDGS NRQGDTGSSR WLPTYTVSGK WNVAEESFMK NNETINTLAL RASYGLTATA GPATNSLAIY KSFITDRFNL SDRENAIRIE DLQNKDLTWE KQYETNIGVD LGMFNNRVSL AADVYRRKAF DLIDYVITSG VGGESIKQGN NADMETKGIE LGLTTQNIVT DNFKWSTTLN FSVFNQEITK LANRPSAFDL VDSNGGNTVG HPRNSIYSYQ FTGLNNQGLP TFNLQEGAEN NITGADFQDT KDVTKYLKYE GSIEPNKSIG LANTFTYKNW SLYVFVVGSG GNKVRLNPVY SNKYTDLTVF TKEYANRWIN PGDENVTNVP VIADRLLNRN YGERDLEIAY NTYNFSDVRI ADGDFVRLKN VTLSWEFPKD YKKKLGLSTF TLKGSAVNPW LIYSDKRLHG QDPEFRNTGG VAFPITSQYT FTLNVSF
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