Gene Fjoh_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2889 
Symbol 
ID5092709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3428712 
End bp3429458 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content37% 
IMG OID644742320 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001195229 
Protein GI146300638 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00153058 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC TAGAAGGAAA AGTAGCAATC ATTACTGGCG CTAGCCGCGG AATTGGTAAA 
GGAATTGCAG AAGTTTTTGC TAAACACGGA GCAAATGTAG CATTTACATA TAGTTCATCT
GCAGCGTCTG CTGAAGCTCT TGAAAAAGAA TTAAATGCTT TAGGAGTAAA AGCAAAAGGT
TACCAATCTA ACGCAGCTGA TTTTAATGAA GCACAAACTT TTGTTGATGC AGTTTTAGCT
GATTTTGGAA CTGTTGATAT TTTAATTAAC AATGCCGGAA TTACAAAAGA TAACTTACTT
ATGCGTATGT CTGAAGCTGA TTTCGACCAA GTTATTGATG TTAACTTGAA ATCTGTTTTC
AATATGACAA AAGCAATCCA AAAAACTTTC TTAAAACAAC GTGCAGGATC TATTATCAAT
ATTAGTTCTG TTGTTGGAGT TTCTGGAAAC GCAGGGCAGA CAAACTATGC TGCTTCAAAA
GCCGGAGCAA TTGGTTTTAC AAAATCAGTA GCTTTAGAAT TAGGTTCTCG TAATATTCGC
TGCAACGCAA TTGCTCCAGG TTTCATTGAA ACTGAAATGA CTGCAAAATT ATCTGAAGAT
GTAGTAAAAG GATGGAGAGA AGGAATTCCG TTGAAACGCG GCGGAACAAC AGAAGATGTA
GCAAACGCTT GTCTTTTCTT AGCTTCAGAC ATGAGTGCTT ACATTACAGG ACAAGTTCTT
AATGTTTGTG GAGGAATGCT TACCTAA
 
Protein sequence
MKLLEGKVAI ITGASRGIGK GIAEVFAKHG ANVAFTYSSS AASAEALEKE LNALGVKAKG 
YQSNAADFNE AQTFVDAVLA DFGTVDILIN NAGITKDNLL MRMSEADFDQ VIDVNLKSVF
NMTKAIQKTF LKQRAGSIIN ISSVVGVSGN AGQTNYAASK AGAIGFTKSV ALELGSRNIR
CNAIAPGFIE TEMTAKLSED VVKGWREGIP LKRGGTTEDV ANACLFLASD MSAYITGQVL
NVCGGMLT