Gene Fjoh_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2872 
Symbol 
ID5090501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3408959 
End bp3409714 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content39% 
IMG OID644742303 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_001195212 
Protein GI146300621 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.240272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGCAA AAAGAATAAT ACCCTGCTTA GATATAAAGA ACGGAAGAAC TGTAAAAGGC 
GTTAATTTCG TTGATTTGCG TGATGCAGGC GATCCTGTAG AACTGGCTGA AATTTATTCG
AGAGAAGGTG CAGACGAATT GGTTTTCCTG GATATTTCGG CAACTGAGGA AAGACGTAAA
ACGCTGGTAA ATATGGTGCG AAGCGTGGCA GAAAAAATCA ACATTCCGTT TACTGTTGGC
GGTGGGATTT CATCTGTTGA AGATGTTGAT ATTCTGCTGA ATAATGGAGC TGATAAAGTT
TCAATTAATT CATCGGCAGT TAAAAATCCG CAGTTGATTA ATGATTTGGC TCAGAAATTT
GGAAGTCAGT GTGTTGTTGT AGCAATCGAT GCTAAACAAA TTGACGGACA ATGGATTGTA
CATTTAGTCG GCGGAAAAGT TCCGACTGAA TTGAATTTAT TCGATTGGGC TGTTGAAGTG
GCAGAACGAG GAGCAGGAGA AATCCTTTTT ACTTCGATGG ATAATGACGG AACTAAAAAT
GGCTTTGCAA ACGAAGCTCT GGCAAAACTA TCAGAATTAG TAAATATTCC AATTATTGCT
TCGGGAGGCG CTGGAAACAT ACAGCATTTC GTAGATTCGT TTAAAGAAGG AAAAGCAGAC
GCCGCTTTGG CTGCAAGTGT TTTTCATTTT AAAGAAATCG AAATCAAAGC ATTAAAGCAA
GAATTAAGAA AGAATGGTGT TGAAGTTAGA CTTTAA
 
Protein sequence
MLAKRIIPCL DIKNGRTVKG VNFVDLRDAG DPVELAEIYS REGADELVFL DISATEERRK 
TLVNMVRSVA EKINIPFTVG GGISSVEDVD ILLNNGADKV SINSSAVKNP QLINDLAQKF
GSQCVVVAID AKQIDGQWIV HLVGGKVPTE LNLFDWAVEV AERGAGEILF TSMDNDGTKN
GFANEALAKL SELVNIPIIA SGGAGNIQHF VDSFKEGKAD AALAASVFHF KEIEIKALKQ
ELRKNGVEVR L