| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2860 |
|---|
| Symbol | |
|---|
| ID | 5090489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3393112 |
|---|
| End bp | 3394581 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644742291 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001195200 |
|---|
| Protein GI | 146300609 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.673164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATT ATTTCAACAC ACTACCACTT AGATTACAAT TAGAGCAACT AGGAGTTTGC
GAATTTATGG AGCAATCAGA ATTTGCAGAC GGAATTTCAG CATTAGCTGG TAAAAAAGTT
GTCATTGTAG GTTGTGGTGC ACAAGGTTTG AATCAAGGTT TAAACATGAG AGATTCAGGT
TTAGATATTT CTTATGCTTT GCGTGCAGAT GCAATTGCAG AAAAGAGAGC TTCATATAAA
AATGCAACTG AAAACGGGTT TAAAGTAGGT ACTTATGAAG AGTTGATTCC AACAGCTGAT
TTAGTTTGTA ACCTTACTCC GGATAAACAG CATACTTCTG TAGTTAATGC TATTATGCCA
TTAATGAAAC AAGGATCAAC TTTAGCTTAT TCTCACGGTT TCAACATTGT TGAAGAAGGA
ATGCAGATTC GTAAAGATAT TACAGTAATT ATGTGTGCTC CTAAATGTCC TGGTTCTGAG
GTTCGTGAAG AGTACAAAAG AGGATTTGGT GTGCCAACAC TTATTGCAGT TCACCCAGAA
AACGATCCAA ACGGATTTGG TTTAGATCAG GCAAAAGCTT ACGCTGTAGC AACTGGAGGA
CACAAAGCAG GAGTTTTAAG ATCATCTTTC GTAGCTGAAG TAAAATCAGA TTTAATGGGT
GAGCAGACAA TTCTTTGCGG ATTGCTTCAA ACTGGATCTA TTTTATGCTT TGATAAAATG
GTTGAAAAAG GAATCGATGC TGCTTATGCT TCAAAATTAA TTCAATATGG ATGGGAAACT
ATCACTGAAG CTTTGAAACA TGGTGGTATT ACAAACATGA TGGATCGTTT AAATAATCCT
TCTAAAATTG AAGCTTACGA ATTAGCAGAA GAATTAAAAG ACATCATGCG TCCGTTATTC
CAAAAACACC AAGACGATAT TATTTCTGGA GAATTCTCAA GAACTATGAT GATCGACTGG
GCTAACGACG ATGTTAACTT ATTAAAATGG AGAGCTGCAA CAGGAGAAAC TAACTTCGAA
AAAACAGCGC CGCAAGAAGC TCCAATCTCT GAGCAGGAAT ATTTTGATAA CGGAGTATTA
ATGATTGCTA TGGTAAAAGC GGGTGTTGAA TTAGCTTTTG AAACTATGAC AGAAGCTGGT
ATCATCGAAG AATCTGCTTA CTACGAGTCA TTACACGAAT TACCATTAAT TGCTAATACT
ATCGCTAGAA AGAAATTATT CGAAATGAAC CGTGTAATTT CTGATACTGC TGAGTACGGA
TGTTATTTAT TTGATCATGC TTGTAAGCCA TTATTGACTG AATTCATGAA AAAAGTAGAA
ACTAACATTA TTGGTAAACC ATTCTCAACT TCAAATGGAG TAGATAATAC GGTATTAATT
GCTGTTAACA AAGAAATTCG TCAGCACCCT ATCGAAGAAG TAGGAGCCTG GTTACGTGAG
TCTATGACAG CAATGAAAAA AATTGGATAA
|
|---|
| Protein sequence | MANYFNTLPL RLQLEQLGVC EFMEQSEFAD GISALAGKKV VIVGCGAQGL NQGLNMRDSG
LDISYALRAD AIAEKRASYK NATENGFKVG TYEELIPTAD LVCNLTPDKQ HTSVVNAIMP
LMKQGSTLAY SHGFNIVEEG MQIRKDITVI MCAPKCPGSE VREEYKRGFG VPTLIAVHPE
NDPNGFGLDQ AKAYAVATGG HKAGVLRSSF VAEVKSDLMG EQTILCGLLQ TGSILCFDKM
VEKGIDAAYA SKLIQYGWET ITEALKHGGI TNMMDRLNNP SKIEAYELAE ELKDIMRPLF
QKHQDDIISG EFSRTMMIDW ANDDVNLLKW RAATGETNFE KTAPQEAPIS EQEYFDNGVL
MIAMVKAGVE LAFETMTEAG IIEESAYYES LHELPLIANT IARKKLFEMN RVISDTAEYG
CYLFDHACKP LLTEFMKKVE TNIIGKPFST SNGVDNTVLI AVNKEIRQHP IEEVGAWLRE
SMTAMKKIG
|
|---|
| |