Gene Fjoh_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2787 
Symbol 
ID5093232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3320224 
End bp3321426 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content32% 
IMG OID644742217 
ProductTPR repeat-containing protein 
Protein accessionYP_001195128 
Protein GI146300537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCA AAAGAATATT TTTAATCCTA TTAATCGCTT CGGCGTACAA TTCTTTTGCT 
CAAAAAGATG GTTATTGGGA TAAAGAGCGT GCCACAACAA AAGAAATTTT AGTTTCTGCC
GGAGATCGTA TTGTTGTAAA AACAGAAGAT CTGCCAGTAG GAACAACTGA AATTGTTTAC
AGAATTACAC TTCTGGATAA AAACCAGCAA ATGGCCAATA GTCTGGTTTC TCTTCTAAAA
TCAATTCCCG ATCCATACGG AATTGGACAA GGCTCTGCAG GAGCTGTTTT TTTAATGTCT
AATATTTCCG GAGACGATCA ATGCACTTAT TCGCTTTTTA CTTCCAGCGA AAACACTAAA
AAATATATAA CTGACGGTAA AGTTGATAAT GCCTGTTTTT CGCAAAAAGA ACCAGTAAGC
AAAGACGCAA AACGTATTTC ATTAGATAAA AATTCTTGTT TAAAAGAAAA TACAAAAGCA
ATTTGGTTTG GTTTTGAAAG CAAAAACTGG TTTTTAAGCC AAAAAGTAGT TTTAGAAGTT
GTGCCGTGGG TTGATGTAAA ATTAAACAGA GGCTGGAATC AGGATAACAA AAATGAAATT
ATCAGTCTTT GCAAAACCTC TACAATGGCA CAGAAAATGG CCAATTCTGA TGATTTTTGT
GTTTGTATTT TAGAGAAAAT CATGAAACAA TATCGTTATT CTGAATTTCA AAAACTACTT
GCCGTTGAAA AAACAAAAGT CTATAAGGAC TTTGGAAATG TATGTTATAA AGATGCCGAC
ATTTCTAAAA ACGTGTATAA CGATTTAAGA AATCAGGTTT CAGGTTTAAT AAAACAGCAA
AAATACAATG AAGCAATTCC AAAATTGGGT ACTATTATCA ACGATGGAAA AGCTACAGCA
TTAGATTACA ATTCAATTGG TTACTGCTAT ATTCTAACCA AACAATATGC AAAAGCATTA
AAATTTCTGC AAGAAGGTGA AAAGTTAGAC GAAACAGAAT TACTTATAAA ATTGAATTTG
GCACACGTTT ATTTGGTGAG TCATAATTAC AGCGATGCCA AAGCAATCTA TAAAAAATAT
CAAAATCAAA ACGTTACTGA CAGCATGAGC TGGAAAGACA AAACAAAATC TGATTTTACT
ATTTTTGAAA AAGCGGGTTT ACCTTCAAAA GACTTCGAAA AAGTTTTAAA ACTATACAAC
TAA
 
Protein sequence
MNFKRIFLIL LIASAYNSFA QKDGYWDKER ATTKEILVSA GDRIVVKTED LPVGTTEIVY 
RITLLDKNQQ MANSLVSLLK SIPDPYGIGQ GSAGAVFLMS NISGDDQCTY SLFTSSENTK
KYITDGKVDN ACFSQKEPVS KDAKRISLDK NSCLKENTKA IWFGFESKNW FLSQKVVLEV
VPWVDVKLNR GWNQDNKNEI ISLCKTSTMA QKMANSDDFC VCILEKIMKQ YRYSEFQKLL
AVEKTKVYKD FGNVCYKDAD ISKNVYNDLR NQVSGLIKQQ KYNEAIPKLG TIINDGKATA
LDYNSIGYCY ILTKQYAKAL KFLQEGEKLD ETELLIKLNL AHVYLVSHNY SDAKAIYKKY
QNQNVTDSMS WKDKTKSDFT IFEKAGLPSK DFEKVLKLYN