Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2787 |
Symbol | |
ID | 5093232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3320224 |
End bp | 3321426 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644742217 |
Product | TPR repeat-containing protein |
Protein accession | YP_001195128 |
Protein GI | 146300537 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTCA AAAGAATATT TTTAATCCTA TTAATCGCTT CGGCGTACAA TTCTTTTGCT CAAAAAGATG GTTATTGGGA TAAAGAGCGT GCCACAACAA AAGAAATTTT AGTTTCTGCC GGAGATCGTA TTGTTGTAAA AACAGAAGAT CTGCCAGTAG GAACAACTGA AATTGTTTAC AGAATTACAC TTCTGGATAA AAACCAGCAA ATGGCCAATA GTCTGGTTTC TCTTCTAAAA TCAATTCCCG ATCCATACGG AATTGGACAA GGCTCTGCAG GAGCTGTTTT TTTAATGTCT AATATTTCCG GAGACGATCA ATGCACTTAT TCGCTTTTTA CTTCCAGCGA AAACACTAAA AAATATATAA CTGACGGTAA AGTTGATAAT GCCTGTTTTT CGCAAAAAGA ACCAGTAAGC AAAGACGCAA AACGTATTTC ATTAGATAAA AATTCTTGTT TAAAAGAAAA TACAAAAGCA ATTTGGTTTG GTTTTGAAAG CAAAAACTGG TTTTTAAGCC AAAAAGTAGT TTTAGAAGTT GTGCCGTGGG TTGATGTAAA ATTAAACAGA GGCTGGAATC AGGATAACAA AAATGAAATT ATCAGTCTTT GCAAAACCTC TACAATGGCA CAGAAAATGG CCAATTCTGA TGATTTTTGT GTTTGTATTT TAGAGAAAAT CATGAAACAA TATCGTTATT CTGAATTTCA AAAACTACTT GCCGTTGAAA AAACAAAAGT CTATAAGGAC TTTGGAAATG TATGTTATAA AGATGCCGAC ATTTCTAAAA ACGTGTATAA CGATTTAAGA AATCAGGTTT CAGGTTTAAT AAAACAGCAA AAATACAATG AAGCAATTCC AAAATTGGGT ACTATTATCA ACGATGGAAA AGCTACAGCA TTAGATTACA ATTCAATTGG TTACTGCTAT ATTCTAACCA AACAATATGC AAAAGCATTA AAATTTCTGC AAGAAGGTGA AAAGTTAGAC GAAACAGAAT TACTTATAAA ATTGAATTTG GCACACGTTT ATTTGGTGAG TCATAATTAC AGCGATGCCA AAGCAATCTA TAAAAAATAT CAAAATCAAA ACGTTACTGA CAGCATGAGC TGGAAAGACA AAACAAAATC TGATTTTACT ATTTTTGAAA AAGCGGGTTT ACCTTCAAAA GACTTCGAAA AAGTTTTAAA ACTATACAAC TAA
|
Protein sequence | MNFKRIFLIL LIASAYNSFA QKDGYWDKER ATTKEILVSA GDRIVVKTED LPVGTTEIVY RITLLDKNQQ MANSLVSLLK SIPDPYGIGQ GSAGAVFLMS NISGDDQCTY SLFTSSENTK KYITDGKVDN ACFSQKEPVS KDAKRISLDK NSCLKENTKA IWFGFESKNW FLSQKVVLEV VPWVDVKLNR GWNQDNKNEI ISLCKTSTMA QKMANSDDFC VCILEKIMKQ YRYSEFQKLL AVEKTKVYKD FGNVCYKDAD ISKNVYNDLR NQVSGLIKQQ KYNEAIPKLG TIINDGKATA LDYNSIGYCY ILTKQYAKAL KFLQEGEKLD ETELLIKLNL AHVYLVSHNY SDAKAIYKKY QNQNVTDSMS WKDKTKSDFT IFEKAGLPSK DFEKVLKLYN
|
| |