| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2762 |
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| Symbol | rpsA |
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| ID | 5093207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 3295840 |
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| End bp | 3297615 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644742192 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001195103 |
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| Protein GI | 146300512 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.841821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAC AAACAAAATC ACAAGAAGAG TTTTTAGCAA ATTTTAACTG GCACAACTTC
CAAGAAGGAA TCGATGCAGT AGATGAAAAA AACTTACAAG AGTTTGAAGA ACTAGTATCA
AAAACTTTCA TCGCTACAGA TCAAGAAGAA GTAGTTGAAG GAGTTGTAGT TAGAATTACA
GATAGAGACG TTATCGTTGA TATCAATGCT AAATCTGAAG GTGTTATTTC TTTAAACGAA
TTTCGTTACA ACCCAAATTT AAAAGTAGGT GACAAAGTAG AAGTATTAAT CGACATCCGT
GAGGATAAAA CAGGTCAATT AGTATTATCT CACAGAAAAG CACGTACTAT CAAATCTTGG
GATAGAGTTA TTGCAGCTAA TGAAACTGGA GAAATCGTTA ACGGTTTTGT TAAATGCAGA
ACTAAAGGAG GTATGATTGT TGACGTATTC GGTATCGAAG CGTTCTTACC TGGATCTCAA
ATTGACGTTA AGCCAATTAG AGACTACGAT GTATATGTAA ACAAAATGAT GGAATTCAAA
GTGGTAAAAA TCAACCACGA ATTCAAAAAC GTAGTTGTAT CTCATAAAGC TCTTATTGAG
GCCGATATTG AAGTACAGAA AAAAGAGATC ATCGGTCAAT TACAAAAAGG ACAAGTATTA
GAAGGTGTTG TTAAAAACAT TACTTCTTAT GGTGTGTTCA TTGACTTAGG TGGTGTTGAC
GGATTAATTC ACATTACTGA CCTTTCTTGG AGTAGAATCA ACCACCCAAG TGAAGTTCTT
GAATTAGACC AAAAATTAAA CGTTGTAATC CTTGATTTCG ATGATGAGAA AACAAGAATT
CAATTAGGAT TGAAACAATT AAACGCTCAC CCATGGGATG CTTTAGATGC TAACTTAACT
GTTGGTGATA AAGTTAAAGG TAAAGTAGTT GTAATCGCTG ATTACGGTGC ATTTATCGAA
GTTGCTGAAG GTGTTGAAGG TTTAATCCAC GTTTCTGAAA TGTCATGGTC AACTCACTTA
CGTTCTGCTC AGGACTTCGT GAAAGTTGGA GATGTTGTTG AAGCAGTTAT TTTAACTCTA
GACAGAGAAG ATCGTAAGAT GTCATTAGGT ATCAAACAAT TAACTCAAGA TCCATGGACT
GACATTACTT CTAAATACCC AGTAGGTTCT AAACATACAG GTATCGTTAG AAACTTTACA
AACTTTGGTA TTTTCGTAGA ATTAGAAGAA GGAATTGATG GATTAATCTA CATTTCTGAC
TTATCTTGGA CTAAGAAAAT TAAACACCCA TCTGAGTTTG TAAACGTTGG AGAAAAACTT
GATGTTGTTG TATTAGAGTT AGATGTTGAA GGACGTAAAT TATCTTTAGG TCACAAACAA
ACTACTGCTA ATCCTTGGGA TCAATACGAA GATTCTTTCG CTGTAGGAAC TATCCACAAC
GGTGAGATTT CTGAAATCGT TGACAAAGGA GCTACTGTAG AATTCGGAGA TGATATCGTT
GCTTTCATTC CTACTCGTCA CCTTGAAAAA GAAGACGGAA AAAAATTGAA AAAAGGTGAT
ACAGCTGATT TCAAAGTAAT TGAATTCAAC AAAGAATTCA AAAGAGTAGT TGCTTCTCAC
ACTGCTATCT TCAGAGAAGA AGAAGAGAAA AACGTGAAAG CTGCTGCTGA AACTACTGCA
TCTGCATCTA CAAACGCACC AGCTGCGACT TTAGGTGACA ACAATGATGT ATTAGCTGCT
TTAAAAGCTA AAATGGAAAA AACTGAGAAA AAATAA
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| Protein sequence | MSEQTKSQEE FLANFNWHNF QEGIDAVDEK NLQEFEELVS KTFIATDQEE VVEGVVVRIT
DRDVIVDINA KSEGVISLNE FRYNPNLKVG DKVEVLIDIR EDKTGQLVLS HRKARTIKSW
DRVIAANETG EIVNGFVKCR TKGGMIVDVF GIEAFLPGSQ IDVKPIRDYD VYVNKMMEFK
VVKINHEFKN VVVSHKALIE ADIEVQKKEI IGQLQKGQVL EGVVKNITSY GVFIDLGGVD
GLIHITDLSW SRINHPSEVL ELDQKLNVVI LDFDDEKTRI QLGLKQLNAH PWDALDANLT
VGDKVKGKVV VIADYGAFIE VAEGVEGLIH VSEMSWSTHL RSAQDFVKVG DVVEAVILTL
DREDRKMSLG IKQLTQDPWT DITSKYPVGS KHTGIVRNFT NFGIFVELEE GIDGLIYISD
LSWTKKIKHP SEFVNVGEKL DVVVLELDVE GRKLSLGHKQ TTANPWDQYE DSFAVGTIHN
GEISEIVDKG ATVEFGDDIV AFIPTRHLEK EDGKKLKKGD TADFKVIEFN KEFKRVVASH
TAIFREEEEK NVKAAAETTA SASTNAPAAT LGDNNDVLAA LKAKMEKTEK K
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