| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2752 |
|---|
| Symbol | |
|---|
| ID | 5090548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3284234 |
|---|
| End bp | 3284800 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 644742182 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001195093 |
|---|
| Protein GI | 146300502 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.613043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTATAA CTAATCAAAA TATCGAAGAA TTAATCGCGC TTTGTAAAAG CAAGAATCAA
AAGGCTCAAT TCGAAATTTA CAATCGTTAT TGTAAGGCTA TGTACAACGT GGCTTACAGG
ATTGTAAAAG ACGAGCATTT TGCACAAGAC GTCATGCAGG AAGGTTTTTT GAAAGCTTTT
ACAAAAATTA ACGATTATAA ACAGGAAGTC GCTTTTGGAG CATGGCTTAA AAGAATCATT
ATTAATTCTA GCATTGATTT TTATAAAAAG AACAATGCTT TTCAGATGGA AGACTTAAAC
AAAACGCTTT ATAAAATTGA AGAAAGCGAT TCTATTTTAT CTGAAAGCAT CGATTTGAAT
TCTCTTAAAG TGAAACAAGT TTTAGATACT ATTTCAGGTT TAAAGGATAA TTACAGAATG
GTTTTAACCC TTTTTTATAT AGAAGGCTAC GATCAGGAAG AAATTTGCGA AATATTAAAT
ATTAGTTATG CTAACTGCAG AACAACTATA AGCCGCGCTA AAGAAAGTTT ACGAAAAAAA
TTAGAAGATA TTGAAATCAT TACTTAA
|
|---|
| Protein sequence | MSITNQNIEE LIALCKSKNQ KAQFEIYNRY CKAMYNVAYR IVKDEHFAQD VMQEGFLKAF
TKINDYKQEV AFGAWLKRII INSSIDFYKK NNAFQMEDLN KTLYKIEESD SILSESIDLN
SLKVKQVLDT ISGLKDNYRM VLTLFYIEGY DQEEICEILN ISYANCRTTI SRAKESLRKK
LEDIEIIT
|
|---|
| |