| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2732 |
|---|
| Symbol | |
|---|
| ID | 5090528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3256566 |
|---|
| End bp | 3257651 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644742155 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001195073 |
|---|
| Protein GI | 146300482 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0844309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA CACTAATTAT AGGAATTGCA ATAGTAAGTT TATCACTTGC CAGCTGCAAA
AAGGAAGTAG AAAATCCTCA AACCAATACT TCTTTCGCCT TAAGCGATAA TATGCTGAAA
ACTACTACTA CGGCAGATGC GAAAACCCAG ACAGTGAAAA ATGAGCTGAG TTTTTATGGA
AAAATTACTG CCGATAATAA TAAATTAATC GATGTTTATC CGCTTGTGGG CGGAAACGTG
ATTAAAGTAA ATGTTGAACT TGGAGATTAT GTAAAAAAAG GCCAGGTATT AGCAACCATA
AAAAGTACTG ATGTCGCTGA TTTTGAAAAA CAATCTATCG ATGCAAAAAA TGATTTGCTT
GTTGCAAAAA ACAAACTAAA AGTTGCTCAG GAATTATACG ACGGAAAATT AAATTCTGAA
AGCGATGTTC TTGAAGCAAA ATCTGAAGTA AACAAAGCAC AGTCACAGCT AAGCAAAATT
CAGGAAACTT ATAAAATTTA CAATATTAAA GCCGGTTCTA TTTACGAAGT AACGGCGCCA
ATAAGTGGTT TTGTTATTCA AAAAAGCATT AATCAGGATA TGCTTTTACG TTCTGATCGT
TCTGAAAATA TTTTTGACAT TGCAGAAATC AGCGAAGTTT GGGCAATGGC CAATATTAAT
GAAATCGACA TTAATAAAAT AAAACTTGGA ATTGATGCCA GCGTAACTAC TCTAAGTTAC
CCTGATAAAG TTTTTAAAGG AAAAGTAGAT AAAATCTTCA ACGTAATTGA TCCCGAAACC
AAAGCAATGC AGGCGCGTAT TAAACTTCAA AACCCTGGTT TTTTATTAAA ACCGGATATG
AATGCTAATA TCAAATTATC CTATAATGAG AATGAATCAA TGATTGCAAT TCCAAGCAAT
GCCATTGTTT TTGATAAAAG TAAAAATTTC GTCATGATCT TTAAAGATCG TCATAACATT
GAAACAAGAC AAGTTGAAGT TTACCGAGTT GTAGGTGATA CAACTTATAT TTCAAGTGGT
TTAAAGGAAA ATGAAAAAGT TATTACCAAC AATCAATTAT TTATTTATCG CGCTTTAAAC
GATTAA
|
|---|
| Protein sequence | MKHTLIIGIA IVSLSLASCK KEVENPQTNT SFALSDNMLK TTTTADAKTQ TVKNELSFYG
KITADNNKLI DVYPLVGGNV IKVNVELGDY VKKGQVLATI KSTDVADFEK QSIDAKNDLL
VAKNKLKVAQ ELYDGKLNSE SDVLEAKSEV NKAQSQLSKI QETYKIYNIK AGSIYEVTAP
ISGFVIQKSI NQDMLLRSDR SENIFDIAEI SEVWAMANIN EIDINKIKLG IDASVTTLSY
PDKVFKGKVD KIFNVIDPET KAMQARIKLQ NPGFLLKPDM NANIKLSYNE NESMIAIPSN
AIVFDKSKNF VMIFKDRHNI ETRQVEVYRV VGDTTYISSG LKENEKVITN NQLFIYRALN
D
|
|---|
| |