Gene Fjoh_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2729 
Symbol 
ID5090525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3251283 
End bp3252434 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content33% 
IMG OID644742152 
ProductMannan endo-1,4-beta-mannosidase 
Protein accessionYP_001195070 
Protein GI146300479 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4124] Beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.737243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTA ACTTAAATAA AACAAATGCC TTGTTATCTC TATTTATGAT AACAGGGCAT 
TTTCTTTTTG CACAAATTGA TAAAAGCGCA ACAAGAGAAA CAAAAAACTT ATATCGCAAT
CTAAAAAGTA TTTCAAAAGA GCATATCTTA TTTGGGCATC AACACGCTTT AGAATACGGA
CACGGCTGGT CAAACGAACC TAATAAATCG GATGTTAAAT TGGTTACAGG TTCACATCCT
GCAGTTGTAG GAATAGATTT CAGCGATTTT TCGGGACGGT CAAGAGAACA AATTAAAAAA
GCAAAAGAAA CTTTAAGAAA AAATGTAATT GATACTTACG AGCGAGGCGG TATCACAACG
GTTTCCTGGC ATTTCAATAA TCCTGCTTCG GGTGGTGGAT TTTACTGGAA AGATTCTATT
TCAGCCCCAT CCATGTCTTT AATAAAAAAA GGAGGTTCGC ATCATGAGCA ATACAAAGAA
ATTTTAAAAA CAATCGCTGA CTTTGCAAAT TCTGCTAAAG CAAAAGATGG TAAATTGGTT
CCAATGATTT TTAGACCTTT TCATGAATTT GATGGTGATT GGTTCTGGTG GGGAAAAAAA
TATACATCGC GTGAGGATTT TATAGAAGTC TGGCAATTTA CTGTGTCATA CCTGAGAGAT
ACTTTAAAAG TTCATAATTT TATTTACGCA TTTTCACCAG ATAATCGATT TAATTCTGAG
TCAGAATATT TAGAACGCTA TCCTGGCGAT GATTATGTTG ATATGTTTGG GATAGATAAT
TATGGAGATT TTGGACGTGA CGGGAAATAT GACTTAGAAA ACGGAATAAA AAAGCTCAAA
ATCATTTCTG ACATTGCAAT TAAAAAGAAC AAATTAGCAG CTTTTACAGA AACCGGCTTA
GAATCAATAA CAAATAAAAA CTGGTGGACA GAAGTTTTAC TTCAATCTAT AAAGAAAGAA
AATATTAAGC TTTGTTATGT CTTAGTCTGG CGAAATGATG CAGTAAGTTT AACGCATTAT
TATGCACCTT TTCCGGGGCA GATTAGTGTT CCTGATTTTC TTCAATTTTA TAATGATCCG
TATACTTTAT TCGAAAACGA TTTGATAAAT GTATATGGAA CTAAATTTTC ATTAAAAAAC
ACCGCAAAAT AG
 
Protein sequence
MKTNLNKTNA LLSLFMITGH FLFAQIDKSA TRETKNLYRN LKSISKEHIL FGHQHALEYG 
HGWSNEPNKS DVKLVTGSHP AVVGIDFSDF SGRSREQIKK AKETLRKNVI DTYERGGITT
VSWHFNNPAS GGGFYWKDSI SAPSMSLIKK GGSHHEQYKE ILKTIADFAN SAKAKDGKLV
PMIFRPFHEF DGDWFWWGKK YTSREDFIEV WQFTVSYLRD TLKVHNFIYA FSPDNRFNSE
SEYLERYPGD DYVDMFGIDN YGDFGRDGKY DLENGIKKLK IISDIAIKKN KLAAFTETGL
ESITNKNWWT EVLLQSIKKE NIKLCYVLVW RNDAVSLTHY YAPFPGQISV PDFLQFYNDP
YTLFENDLIN VYGTKFSLKN TAK