Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2729 |
Symbol | |
ID | 5090525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3251283 |
End bp | 3252434 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644742152 |
Product | Mannan endo-1,4-beta-mannosidase |
Protein accession | YP_001195070 |
Protein GI | 146300479 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4124] Beta-mannanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.737243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTA ACTTAAATAA AACAAATGCC TTGTTATCTC TATTTATGAT AACAGGGCAT TTTCTTTTTG CACAAATTGA TAAAAGCGCA ACAAGAGAAA CAAAAAACTT ATATCGCAAT CTAAAAAGTA TTTCAAAAGA GCATATCTTA TTTGGGCATC AACACGCTTT AGAATACGGA CACGGCTGGT CAAACGAACC TAATAAATCG GATGTTAAAT TGGTTACAGG TTCACATCCT GCAGTTGTAG GAATAGATTT CAGCGATTTT TCGGGACGGT CAAGAGAACA AATTAAAAAA GCAAAAGAAA CTTTAAGAAA AAATGTAATT GATACTTACG AGCGAGGCGG TATCACAACG GTTTCCTGGC ATTTCAATAA TCCTGCTTCG GGTGGTGGAT TTTACTGGAA AGATTCTATT TCAGCCCCAT CCATGTCTTT AATAAAAAAA GGAGGTTCGC ATCATGAGCA ATACAAAGAA ATTTTAAAAA CAATCGCTGA CTTTGCAAAT TCTGCTAAAG CAAAAGATGG TAAATTGGTT CCAATGATTT TTAGACCTTT TCATGAATTT GATGGTGATT GGTTCTGGTG GGGAAAAAAA TATACATCGC GTGAGGATTT TATAGAAGTC TGGCAATTTA CTGTGTCATA CCTGAGAGAT ACTTTAAAAG TTCATAATTT TATTTACGCA TTTTCACCAG ATAATCGATT TAATTCTGAG TCAGAATATT TAGAACGCTA TCCTGGCGAT GATTATGTTG ATATGTTTGG GATAGATAAT TATGGAGATT TTGGACGTGA CGGGAAATAT GACTTAGAAA ACGGAATAAA AAAGCTCAAA ATCATTTCTG ACATTGCAAT TAAAAAGAAC AAATTAGCAG CTTTTACAGA AACCGGCTTA GAATCAATAA CAAATAAAAA CTGGTGGACA GAAGTTTTAC TTCAATCTAT AAAGAAAGAA AATATTAAGC TTTGTTATGT CTTAGTCTGG CGAAATGATG CAGTAAGTTT AACGCATTAT TATGCACCTT TTCCGGGGCA GATTAGTGTT CCTGATTTTC TTCAATTTTA TAATGATCCG TATACTTTAT TCGAAAACGA TTTGATAAAT GTATATGGAA CTAAATTTTC ATTAAAAAAC ACCGCAAAAT AG
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Protein sequence | MKTNLNKTNA LLSLFMITGH FLFAQIDKSA TRETKNLYRN LKSISKEHIL FGHQHALEYG HGWSNEPNKS DVKLVTGSHP AVVGIDFSDF SGRSREQIKK AKETLRKNVI DTYERGGITT VSWHFNNPAS GGGFYWKDSI SAPSMSLIKK GGSHHEQYKE ILKTIADFAN SAKAKDGKLV PMIFRPFHEF DGDWFWWGKK YTSREDFIEV WQFTVSYLRD TLKVHNFIYA FSPDNRFNSE SEYLERYPGD DYVDMFGIDN YGDFGRDGKY DLENGIKKLK IISDIAIKKN KLAAFTETGL ESITNKNWWT EVLLQSIKKE NIKLCYVLVW RNDAVSLTHY YAPFPGQISV PDFLQFYNDP YTLFENDLIN VYGTKFSLKN TAK
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