Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2720 |
Symbol | |
ID | 5090516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3242147 |
End bp | 3243265 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644742143 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001195061 |
Protein GI | 146300470 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.737243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA TAGTATCGAG TTCGTACTTA TTAAAACAAT TACAAGTATT AGGAAGCGTT ATTAACAGTA ATAATACACT TCCTATTTTA GATAACTTTT TATTTGAACT AGACAATAAT GAGTTGACAG TTTCGGCTTC AGACCTTGAA ACTACAATGT CTGCTACATT ATCAATCGAT TCTACAAGTA AAGGAAGCGT TGCTGTACCG GCAAAACTTT TACTTGAAAT TTTAAAGACA TTTCCAGAGC AGCCTTTAAC TTTTACAGTT GAAGACAATA ATACAGTCGA AATCAGCTCT AATTCAGGAA AATATGCATT AGCGTATGCT GCCGGAGAAG AATTCCCTAA GTCTGTAAAT CTGGAAGATC CGTCTGTAAC TTTAGTTCCT GCTGATGTAT TGGCAACTGC GGTAAGTAAA ACCATTTTTG CTGCCGGAAA CGATGATTTA CGTCCGGTAA TGTCTGGAGT TTTCTTCCAG TTCTCTCCAG AAGGTTTAAC TTTTGTTGCT ACAGATGCTC ATAAATTAGT AAAATATGCA CGTGCAGATG TAAAAGCATC TCAGGTTGCT GATTTTATTA TGCCGAAGAA ACCTTTAAAT ATCTTAAAAA GTATTTTAGG AAGTTCTGAT GCGGAAGTAA AAATTGAATA CAACGATTCA AATGCGACTT TCTCATTTGA CAATTATATC TTAATGTGTC GTTTAATCGA CGGAAAATAC CCTAATTATG AAGCGGTGAT TCCTAAAGAA AATCCAAACA AATTATTAAT CGATCGTTCT TTATTTTTAA GCTCTGTTCG TCGTGTTGCG ATTTTCTCAA ACAAAACTAC ACACCAAATT CGTTTAAAAA TTGCAGGAGC TGAATTAAAT GTTTCTGCTG AAGATATCGA TTACTCAAAT AAAGCAGAAG AAAGACTAAC TTGTGATTAT CAAGGTGATG ATCTTCAAAT TGGTTTTAAC TCTCGTTTCT TAATCGAAAT GCTGACAAAC CTTCAATCTG ATGTGATTAT GTTAGAGATG TCATTACCTA ACAGAGCCGG GATTTTAACT CCTGCTGATG GCTTAGAAGA AGGTGAAACA GTAACAATGT TGGTAATGCC CGTAATGTTA AATAGTTAA
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Protein sequence | MKFIVSSSYL LKQLQVLGSV INSNNTLPIL DNFLFELDNN ELTVSASDLE TTMSATLSID STSKGSVAVP AKLLLEILKT FPEQPLTFTV EDNNTVEISS NSGKYALAYA AGEEFPKSVN LEDPSVTLVP ADVLATAVSK TIFAAGNDDL RPVMSGVFFQ FSPEGLTFVA TDAHKLVKYA RADVKASQVA DFIMPKKPLN ILKSILGSSD AEVKIEYNDS NATFSFDNYI LMCRLIDGKY PNYEAVIPKE NPNKLLIDRS LFLSSVRRVA IFSNKTTHQI RLKIAGAELN VSAEDIDYSN KAEERLTCDY QGDDLQIGFN SRFLIEMLTN LQSDVIMLEM SLPNRAGILT PADGLEEGET VTMLVMPVML NS
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