Gene Fjoh_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2720 
Symbol 
ID5090516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3242147 
End bp3243265 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content34% 
IMG OID644742143 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_001195061 
Protein GI146300470 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.737243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TAGTATCGAG TTCGTACTTA TTAAAACAAT TACAAGTATT AGGAAGCGTT 
ATTAACAGTA ATAATACACT TCCTATTTTA GATAACTTTT TATTTGAACT AGACAATAAT
GAGTTGACAG TTTCGGCTTC AGACCTTGAA ACTACAATGT CTGCTACATT ATCAATCGAT
TCTACAAGTA AAGGAAGCGT TGCTGTACCG GCAAAACTTT TACTTGAAAT TTTAAAGACA
TTTCCAGAGC AGCCTTTAAC TTTTACAGTT GAAGACAATA ATACAGTCGA AATCAGCTCT
AATTCAGGAA AATATGCATT AGCGTATGCT GCCGGAGAAG AATTCCCTAA GTCTGTAAAT
CTGGAAGATC CGTCTGTAAC TTTAGTTCCT GCTGATGTAT TGGCAACTGC GGTAAGTAAA
ACCATTTTTG CTGCCGGAAA CGATGATTTA CGTCCGGTAA TGTCTGGAGT TTTCTTCCAG
TTCTCTCCAG AAGGTTTAAC TTTTGTTGCT ACAGATGCTC ATAAATTAGT AAAATATGCA
CGTGCAGATG TAAAAGCATC TCAGGTTGCT GATTTTATTA TGCCGAAGAA ACCTTTAAAT
ATCTTAAAAA GTATTTTAGG AAGTTCTGAT GCGGAAGTAA AAATTGAATA CAACGATTCA
AATGCGACTT TCTCATTTGA CAATTATATC TTAATGTGTC GTTTAATCGA CGGAAAATAC
CCTAATTATG AAGCGGTGAT TCCTAAAGAA AATCCAAACA AATTATTAAT CGATCGTTCT
TTATTTTTAA GCTCTGTTCG TCGTGTTGCG ATTTTCTCAA ACAAAACTAC ACACCAAATT
CGTTTAAAAA TTGCAGGAGC TGAATTAAAT GTTTCTGCTG AAGATATCGA TTACTCAAAT
AAAGCAGAAG AAAGACTAAC TTGTGATTAT CAAGGTGATG ATCTTCAAAT TGGTTTTAAC
TCTCGTTTCT TAATCGAAAT GCTGACAAAC CTTCAATCTG ATGTGATTAT GTTAGAGATG
TCATTACCTA ACAGAGCCGG GATTTTAACT CCTGCTGATG GCTTAGAAGA AGGTGAAACA
GTAACAATGT TGGTAATGCC CGTAATGTTA AATAGTTAA
 
Protein sequence
MKFIVSSSYL LKQLQVLGSV INSNNTLPIL DNFLFELDNN ELTVSASDLE TTMSATLSID 
STSKGSVAVP AKLLLEILKT FPEQPLTFTV EDNNTVEISS NSGKYALAYA AGEEFPKSVN
LEDPSVTLVP ADVLATAVSK TIFAAGNDDL RPVMSGVFFQ FSPEGLTFVA TDAHKLVKYA
RADVKASQVA DFIMPKKPLN ILKSILGSSD AEVKIEYNDS NATFSFDNYI LMCRLIDGKY
PNYEAVIPKE NPNKLLIDRS LFLSSVRRVA IFSNKTTHQI RLKIAGAELN VSAEDIDYSN
KAEERLTCDY QGDDLQIGFN SRFLIEMLTN LQSDVIMLEM SLPNRAGILT PADGLEEGET
VTMLVMPVML NS