Gene Fjoh_2713 details

Gene Information

• Locus tag: Fjoh_2713
• ID: 5090509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 3231084
• End bp: 3233075
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 644742136
• Product: glycoside hydrolase family protein
• Protein accession: YP_001195054
• Protein GI: 146300463
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3250] Beta-galactosidase/beta-glucuronidase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0942684
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTATC AAAATAAACT TCATTGTATA ATGTCCCTTT GTCTGGCAGG TTTTACATCA 
ATTGCCTTTG CACAAAAAAT TGAATTAAAA AGTAATTGGA CATATCGTGA AGAAAAAACA 
CAAAAATGGT ATACGGCCAG CGTTCCGGGA GAAATCCATA CCGATTTGCT AAACAGCAAA 
TTAATACCAG ACCCATTTTA CAGAGATAAC GAAAAAAAAC TGCAGTGGAT CGAACGTAAA 
AACTGGGAAT ACAAAACTGC TTTTCAGGTT ACGGCAAATA TGCTGAAAAA GAAAAATACA 
GAATTAGTTT TTGACGGATT AGATACTTAC GCAGCTGTTT ATGTAAACAA TCAGCTGGTT 
TTAAAAGCCG ATAATATGTT CCGTCAATGG CGGGTTGATG TAAAAAAAGT CTTGAAATCA 
GGAAATAATG ATTTACGAAT CGTATTTCAA TCGGCACAAA ATGTGGTAGA TTCATTGGCA 
AAAAAAGATT ACCCATTTGT AATTCCAGAC AATCCGCGTA CTTATGTACG CAAAGCCCAA 
TACCATTTTG GCTGGGATTG GGGACCAAAA TTCACAACCT GCGGCATATG GAAAACACCA 
AGATTTGAAG CTTATGATGA AAAAGAACCT GAGAAACCGT ATGTATTAAC TCGAAAAATC 
GAATTAATAC AAGACAAAGA CAGTCTTGGC AGTTCGTTTT ATTTTAAAAT TGACGGAAAC 
CCGGTTTATA TGAAAGGAGC TAATTATATT CCATCTGATG CTTTTCTTTC AAGAGTATCT 
AAAAAAGAAT ATGAAAAAAT AGTTTTATCT GCCAAAGAGG CCAATATGAA TATGCTTCGC 
GTTTGGGGCG GCGGTATTTA TGAAGACGAT TATTTCTACG ATTTATGTGA TAAATACGGT 
ATAAATGTCT GGCAGGATTT TATGTTTGCA GGTACTATGG TTCCCGGAGA CGATGCTTTT 
TTTGAAAATG TAAAAAAAGA AGTTCAATAT CAGGTAAAAA GACTGCGTCA TCATCCAAGT 
ATTGTTTTAT GGTGCGGCAA CAACGAATCT GATGAAGCTT TTAAAAACTG GGGCTGGATG 
AAAAATTTCA AAATTTCAAA GCAGGATTCC ATTCGTTTGT GGAAAGATTA CACACGTTTA 
TTTCATGACA GTATTCCGAA ATGGGTAAAA GAAGTCGATG GTAAACGTCC GTATTTAAGC 
TCTTCACCAT TATACCATTG GTCAAAACCA AAAAGCGTAA CCGAAGGAGA CAGCCATTAT 
TGGGGAATCT GGTGGGGATT GGAAGATATT GAAGCCGTAC AGAAAAAAAC GGGACGATTT 
GTGAGCGAAT ACGGAATGCT GTCGATGCCA AATTATTCGT CTGTAGAAGT ATTTACTCTG 
CCTGAAGACC GATATTTATA TTCGGATATA GTATTGGCGC ATCAAAAATC TGGAAAAGGA 
TTTGAAAAGC TGGATTCCTA TTTAAACAGG TATTTTATCG ATTCGGCTAA AATAAAAAAC 
ATAAGTTTAG AAGATTATAC CTATTTAACG CAATGTCTTC AATACTATGT TGTTAAAAAT 
ATCGCAGGCA CACATCGTTC TAAAGAACCG TACAATATGG GAACTTTAAT CTGGCAGTTA 
AACGACTGCT GGCCAACAGC AAGCTGGAGT ATTACAGATT ATTATAACCG CGAACCACGA 
GCTTCGTGGT ATGCCATAAG AGAAGCGTAC AGAGACGATG TAAAACCAGA AACTGATTTT 
ATACGCCCAA GAGATTTATC TTTAGAAGAT CCAAAAATCA ACTGGGAAAT AAAAGGAAAT 
AACATAATTA TAAAAGCTCT GAAAATGGCA AAATACGTTT ACATCTCTAT GAAAGGATAT 
AATGGAAAAT GGAGCGATAA TTATTTTGAT CTAAAAGCAG GAGAAGAAAA AACAATTTCG 
TTTGAAGGGA AAATAACGAA GCCAGAGATT AAGATTTATT CTTTGTTTGA GGTTTTGGAA 
AAGTATAAAT AA 

 

Protein sequence

MNYQNKLHCI MSLCLAGFTS IAFAQKIELK SNWTYREEKT QKWYTASVPG EIHTDLLNSK 
LIPDPFYRDN EKKLQWIERK NWEYKTAFQV TANMLKKKNT ELVFDGLDTY AAVYVNNQLV 
LKADNMFRQW RVDVKKVLKS GNNDLRIVFQ SAQNVVDSLA KKDYPFVIPD NPRTYVRKAQ 
YHFGWDWGPK FTTCGIWKTP RFEAYDEKEP EKPYVLTRKI ELIQDKDSLG SSFYFKIDGN 
PVYMKGANYI PSDAFLSRVS KKEYEKIVLS AKEANMNMLR VWGGGIYEDD YFYDLCDKYG 
INVWQDFMFA GTMVPGDDAF FENVKKEVQY QVKRLRHHPS IVLWCGNNES DEAFKNWGWM 
KNFKISKQDS IRLWKDYTRL FHDSIPKWVK EVDGKRPYLS SSPLYHWSKP KSVTEGDSHY 
WGIWWGLEDI EAVQKKTGRF VSEYGMLSMP NYSSVEVFTL PEDRYLYSDI VLAHQKSGKG 
FEKLDSYLNR YFIDSAKIKN ISLEDYTYLT QCLQYYVVKN IAGTHRSKEP YNMGTLIWQL 
NDCWPTASWS ITDYYNREPR ASWYAIREAY RDDVKPETDF IRPRDLSLED PKINWEIKGN 
NIIIKALKMA KYVYISMKGY NGKWSDNYFD LKAGEEKTIS FEGKITKPEI KIYSLFEVLE 
KYK