| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2707 |
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| Symbol | trmE |
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| ID | 5090503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3220036 |
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| End bp | 3221436 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644742130 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001195048 |
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| Protein GI | 146300457 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.622975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAATC AAGATTCTAT AGTTGCATTA GCTACTCCAT CAGGAGCCGG AGCTATTGCT
GTTATTCGTA TTTCGGGCGC TGAAGCTGTT TCAATAGGAA ATTCTGTTTT TAAATCTATC
AAAAACAAAG ACTTAACGAA ACAAAAAACG CATACTTTGC ATTTGGGCCA TATTGTTGAC
AACGGAAAAA CACTTGATGA AGTTTTGGTT TCTGTTTTTA AAGGCCCTAA TTCGTATACT
GGAGAAGATA CAATAGAAAT TTCATGCCAC GGATCTACAT ATATTCAGCA GCAGATTATT
CAATTATTAT TGAGAAAAGG CTGCAGAATG GCCGATGCCG GTGAATTTAC TTTAAGAGCT
TTCTTAAATG GGAAGTTAGA TTTATCTCAG GCAGAAGCTG TTGCAGATTT AATTTCATCT
GATAATGAAG CTTCACACCA CATTGCCATG CAGCAAATGC GAGGTGGTTT CAGCAATGAA
ATTGCCAAAT TGCGAGAAGA GCTTTTAAAT TTTGCTTCTT TGATTGAACT TGAATTGGAC
TTTGCAGAGG AAGATGTGGA ATTTGCCGAC AGAACTCAGT TTCATGAATT ATTAAACAGA
ATTGAATTTG TTTTAAAACG TCTAATAGAT TCATTTGCAG TTGGAAATGT TATTAAAAAC
GGAATCCCGG TTGCCATTGT TGGTGAGCCG AATGTTGGTA AATCGACTTT ATTAAATGCT
TTATTAAATG AAGAGCGAGC GATTGTTTCT GACATTGCCG GAACAACGCG CGATACAATT
GAAGATGAGC TGGTTATTGG AGGTATTGGT TTTAGATTTA TTGATACAGC CGGAATACGC
GAAACGAAAG ATGTTGTAGA AAGTATTGGA ATCAAGAAAA CTTTCGAAAA AATAGATCAG
GCACAAGTTG TTATTTATTT GTTTGATGGT TTAAAATTTA AAGCATCGAG TTCTGAATTT
GTTTCGGAAA TTGAACAAAT TAAAAACAAA TATCCTTTAA AACCGCTTCT TATAGTGGTC
AATAAAAAGG ATATTTTATC TGAAGATGAA GTTTTAAATA TTACACAAAA GCTCGAAAAC
TTAAACGCGA AACTTCTATT AATTTCGGCA AAACAAAAAA TTGGAGTTGA AGAATTAAAG
AACGAATTAT TATCATTTGT TAATACTGGA GCATTACGAA ATAATGAAAC AATTGTTACA
AATACAAGAC ATTATGACTC TTTACTGAAA GCTTTAGATG AAATACAAAA AGTAAAATTT
GGTCTTGAAA CCAATCTTTC AAGTGACTTA ATTGCACTTG ATATTAAAGA AGCCTTATAT
CAATTCGGAC TTATCACAGG TCAGGTTTCC AACGACGAAT TACTAGGGAA TATCTTTGCA
AATTTCTGTA TTGGCAAGTA A
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| Protein sequence | MINQDSIVAL ATPSGAGAIA VIRISGAEAV SIGNSVFKSI KNKDLTKQKT HTLHLGHIVD
NGKTLDEVLV SVFKGPNSYT GEDTIEISCH GSTYIQQQII QLLLRKGCRM ADAGEFTLRA
FLNGKLDLSQ AEAVADLISS DNEASHHIAM QQMRGGFSNE IAKLREELLN FASLIELELD
FAEEDVEFAD RTQFHELLNR IEFVLKRLID SFAVGNVIKN GIPVAIVGEP NVGKSTLLNA
LLNEERAIVS DIAGTTRDTI EDELVIGGIG FRFIDTAGIR ETKDVVESIG IKKTFEKIDQ
AQVVIYLFDG LKFKASSSEF VSEIEQIKNK YPLKPLLIVV NKKDILSEDE VLNITQKLEN
LNAKLLLISA KQKIGVEELK NELLSFVNTG ALRNNETIVT NTRHYDSLLK ALDEIQKVKF
GLETNLSSDL IALDIKEALY QFGLITGQVS NDELLGNIFA NFCIGK
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