Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2687 |
Symbol | |
ID | 5090262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3194046 |
End bp | 3198602 |
Gene Length | 4557 bp |
Protein Length | 1518 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644742111 |
Product | hypothetical protein |
Protein accession | YP_001195029 |
Protein GI | 146300438 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0579108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA ACAAACTCTT AGCTGTAATA ATACTAGTTG GATTTCTAAG TTTTGGAATG AAATACAATA CTATTATTAA GAATAATTTT GTTGCTCCTA TAGTTGAACG TTTTGTAAAA GCTGAAAAAA CTTTTATTGA TGAGAAAAAA GAAAATAAAG ATAAAAAAGC TGAAATTAAA GAAGACAAAA CAAATACATC TACTGTAGCT GCGACAGTTA CTGTAGCAAA CGCTGTAGCG GTTAATGGAG GTGGGAACGC GCAGCCTGGT TCTCAGCTTG ATTTTACTAT AACTATAACA AATACAGGTA CAGATGATGC TTTAGGAATG AATTTTCAGG ATATTTTAGA TTCTAATCTA ACCTTAGTTC CAAACTCTTT TAAAGCAACC CCAATAGCAA ACAACAATTC GTATTCCTGC ATTGGAAACG TTGGAATTAG TGTGGATGCG GCAGGTGGTG TTTTAACAAA CGATGTCAGT CCGGATGGAA CTGCTTTATC GGCTTCTTTA TTAACAGGAG CAGCAAATGG AACCGCAGTT CTGAATGCGA ACGGTTCTTT TATTTATAAT CCAAATGCAG GATATTCTGG TTCAGATAGT TTTACTTATA CTTTGACCAC TGCCAGCGGC AAGACCTCAA CTGCAACAGT AAATATTACT GTAAGCACTC CTATAATATT TGTTAATAGT GCAGCGGCTG CTGCAGGAAA CGGAACTCTA GCATCACCTT ATAAAACTTT AAACAGTATT ACAGGAAGTA ATGCCTTTCC TGTTTTTATT TATACGGGAA CAGTTACTGG ACTTTTAACC TTAAATGATA ATCAAAAAGT AATTGGTCAG GGGGCAGCTG CAAGTCTGAC TTCGATATTA AGTCTTGCTG TGCCGGCCTA TAGTAATGTT TTGCCCGCTA CCGGAGGAAC AAATCCGACT ATTGCCGGTG TCAATTTAAA AGCAAATAAC GATATCCAAG CTGTTGCATT GACAGGAACT CTATCTGGTT CGAACGTTGG AGCTTTGAAA ATAAGAAATA CAACTATTAA TACAACAAAT TTACAAGCTG TTAATATTAC TGGCGGCGGC GCTTTAGACT GTATTTTTAC CAGTATTTCT GCCAGCGGCG TCTCTAAGGG AATTTCAGTA ACCGGCGCGC AGGGAAGTTT TCAGGTGACA GGAACAGGAT CTACGGCCGG ATCTGGCGGG ACAATTCAAA ATATATCTTT AAGAGGTGCT GAGTTTATTT CGTGCGCCAA TGTTACACTT AAGAACATGA ATTTTACCAA TGCAAATAAC TCTTCGACAG TAATGAGTGA TGCCGAAGAT GACAACACCA ATTCTTACGG CGCACTGCAT TTTAAAACTG TCTCTGGAGG CGTTAATTTA GATAATATTT TGATCACCGG CACTACAAAC TCTGTTGGAA TAAATTTAAA TGATGTTAAT AATTTCGTAT TATCCAATAG TACAATTACA GGATGCGGAA GTGCAAATGG AGGAAATGCA AATGTGGGAG GAATATTTGC ATTAAATTTA AGAGGAACAA GTTCAATCAC AAACACAAAT GTTAATGATT CCTGGGGAAG AGGTTTTTTT GGATTTAACG GCCAGCTTTC TCAAAATCCT ACGCTTAATT TGACAGTAAC CGGCTCTCAA TTTAAAAACT CTTTTAATAA ATCAAACGGA GACAGTAATT TTATTTTTCA GGCTAAAGGG ACTACAAACA ATACATTGGT TTTTAAAAAG AATGATTTTT CTAATTCAAA AACGACCGGT TTAGCATTGA ATTTTAGCGG ATCTTCTGTA AATACCGTCC AAATAGGAGG AACTAATGCA TCTACAGATG CTAATACTAT AAATGCTGCA GCTTCAAGTC CTGGAAGTAA TGGTTTGTCT TTACAAGTAA CAGGCAATGC AGCTGTGAAC TACAATATTA TAAATAACAC TTTAAAGTCA AGCTACAATG CTCTTTATGC ATGCAGTGTC GGAAATCAGG GTTCGGGAAC GATAAAAGGA CGTATAAATA ATAATACCAT TGATGGCGGC GGCTCAACTT CTTCCAGCAA TGGAATCAGT GTTGCTGCTT ATGGTAATGC CAAACATATT ACTGAGATAG CCAATAATAT AATCACTAAT GCCGCCAATT ACGGCATTTT CTCTGAAGCA AATGATAATG CCGTATTAAG TGCAGGAAGA ATTGATGCTT CCATCACCAA TAATAATATT AGCGTTGCAA ATAATGCCTA CACTCATATT GGAGTAGTGG CCTATGCAGA TAATGCCTCC AGTACGATGA TCAGTGCTGC AAAGGTTACT GGTAACATAG TTAACTCTGC AAGCGGATTA GCAGCAGGGA ATTTTGATGT ACTCTCTCAG GGACCTAGTT GTAAGGTAAT TTTACAGGGT AATACCGCAT ACGTTTCAGG AACTGGAAAC AGAAGTGCGG CATTGACAAA TTTCTGGAAT AGCAATAATC CTAATACTCC AACAGGAGCA GGACTGGATG AAGGCGGTAC TGGAACCATA ATTTCGGGAA CTGTCACTAT TCCTGACAAT GCAAGCGCAT CAAAAATGGC CATCCAGAAA GAAACGCCGC AAGAAGAGGC CGACCCTGCG GCAGCTGTCA ATAATACTGT ACCTGATAAT GCAGTAACTG CTAAAACTGT TGCGGCAAAT GCTGTTAATG AAACCCTTAC TGCCGGACCA TTTGCTCTGG CTGCAGGAAA AAGCACTGTG ATTACTTTTA GTGCGACAAT CAATGCAGCA GGCACGTTAC CGCAAAACAC CTGTTCGGTT ACCAATCAGG CTGCCGTTAG CGGTTCTAAT TTTACAACTG TAAATTCTAA TATTACAACA ACATCAATTA AGCCAGCAAT TGCAACAGTA ACGGCGGACA CAGAGAATAT CCCTTGTTTA GGAAGCACGT CCGTTACATT AAACGCAGCT TGCCCGCTTG GTACAACTGC GACCTGGTAT ACCGCAATGA ACGGGGGAAC CAGTTTTGCA ACCGGAAATT CGGTTTCTGC AACTCCTATG GCAAATAATA CGACGTATTG TGTTGCTTGT GAGACAGCTT ATTGCGCAAG TGACAGGGTT CTTGTTAAAA CTGTGACGGG AACTCCTTCA ACAACGTCGC CCCCAGTTAC CGTAACCGAA TGTGATTCTT ATACCTGGAG TGTTAACGGA ACAACTTATA CTAGTTCTGG AACATACACT GCTGTTGTTG GATGTGATAC CAAAACTCTA AATTTAACAA TAACTCCGTC TGCAACTTCA ACACCTGAAA CCATAACGGC TTGTGATTCT TACACATGGA GTGCCAATGG AACAACTTAT ACCACCTCTG GAACATACAC AGCAGTTGTA GGATGTGATA CTAAGACTCT AAACTTAACA ATCAATCCTT CAACCTCATC AGCAACTGAA ACTGTTTCTA GATGCGACAG CTATACCTGG CCGGTAAATG GCACAACTTA TACAGCTACT GGAAATTATA CCCATACGAT AGGATGTGAT ACCAAAACTT TAGCGTTAAC GATTACCAAT TCTACGAGTT CTACCCAGGC TGAAACGGCT TGCGACAGCT ATACCTGGCC GGTGAATGGC ACAACTTATA CCGCTTCGGG AAATTACACG TATTCTTTGG GATGTGATAC CAAAACTTTA GCGTTAACGA TTACCAATTC TACGAGTTCT ACCCAGACTG AAACGGCTTG CGACAGCTAT ACCTGGCCGG TGAATGGCAC CACTTATACC GCTTCGGGGA ATTACAGTTA TTCTTTGGGA TGTGACACTA AAACTTTAGC GTTAACGATC ACCAATTCTA CAAGTTCAAC GCAGACAGAG ACCGCCTGCG ACAGCTATAC ATGGCCGGTG AATGGCACCA CTTATACCGC TTCGGGTAAT TACAGTTATT CTTCGGGATG CGACACTAAA ACTTTAGCAT TGACTATCAC TAATTCTACA AGTTCAACGC AGACAGAGAC CGCCTGCGAC AGCTATACAT GGCCGGTGAA TGGCACCACT TATACCGCTT CGGGGAATTA CAGTTATTCT TTGGGATGCG ACATTAAAAC TTTAGCATTG ACCATTAATA ATTCTTCTGC AATTCAGAAA ACAGTAGCAT TAAATTCTGG AATCTTGACC TCGGACCATT CCGGAGCCAT TTACCAGTGG TATAAGTGCC CCAACACACT GTTGGCAAAC GAAACCAGCC AATCCTTTAC GCCATCCTCC GTTGGAGACT ATAAAGTTGA AATTACCGTT GCAGGGTGCA CGATTGTTTC TGATTGTATT ACTGTAAGTA CTTTGGGGCT GTACGATTTC AAAGCAGCCG ACTTTAAAAT GTATCCTGTT CCAAGCAAAG GAATTTTAAA CATTCTTACC AGATACGATG GGAACTACAG CATAATAGAC GCTGCTGGAA AAATTGTAAA ATCAATAAAT CTTAATGCAG ATTCTTTAAA TACAATTCAC CTGGAAAATC TTTCAGATGG CGTTTTTTTA ATTAAAAAAA CAGATGGAAA TTCATTTAAA GCCCAGAAAT TTATTTTGAA AAAATAA
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Protein sequence | MKNNKLLAVI ILVGFLSFGM KYNTIIKNNF VAPIVERFVK AEKTFIDEKK ENKDKKAEIK EDKTNTSTVA ATVTVANAVA VNGGGNAQPG SQLDFTITIT NTGTDDALGM NFQDILDSNL TLVPNSFKAT PIANNNSYSC IGNVGISVDA AGGVLTNDVS PDGTALSASL LTGAANGTAV LNANGSFIYN PNAGYSGSDS FTYTLTTASG KTSTATVNIT VSTPIIFVNS AAAAAGNGTL ASPYKTLNSI TGSNAFPVFI YTGTVTGLLT LNDNQKVIGQ GAAASLTSIL SLAVPAYSNV LPATGGTNPT IAGVNLKANN DIQAVALTGT LSGSNVGALK IRNTTINTTN LQAVNITGGG ALDCIFTSIS ASGVSKGISV TGAQGSFQVT GTGSTAGSGG TIQNISLRGA EFISCANVTL KNMNFTNANN SSTVMSDAED DNTNSYGALH FKTVSGGVNL DNILITGTTN SVGINLNDVN NFVLSNSTIT GCGSANGGNA NVGGIFALNL RGTSSITNTN VNDSWGRGFF GFNGQLSQNP TLNLTVTGSQ FKNSFNKSNG DSNFIFQAKG TTNNTLVFKK NDFSNSKTTG LALNFSGSSV NTVQIGGTNA STDANTINAA ASSPGSNGLS LQVTGNAAVN YNIINNTLKS SYNALYACSV GNQGSGTIKG RINNNTIDGG GSTSSSNGIS VAAYGNAKHI TEIANNIITN AANYGIFSEA NDNAVLSAGR IDASITNNNI SVANNAYTHI GVVAYADNAS STMISAAKVT GNIVNSASGL AAGNFDVLSQ GPSCKVILQG NTAYVSGTGN RSAALTNFWN SNNPNTPTGA GLDEGGTGTI ISGTVTIPDN ASASKMAIQK ETPQEEADPA AAVNNTVPDN AVTAKTVAAN AVNETLTAGP FALAAGKSTV ITFSATINAA GTLPQNTCSV TNQAAVSGSN FTTVNSNITT TSIKPAIATV TADTENIPCL GSTSVTLNAA CPLGTTATWY TAMNGGTSFA TGNSVSATPM ANNTTYCVAC ETAYCASDRV LVKTVTGTPS TTSPPVTVTE CDSYTWSVNG TTYTSSGTYT AVVGCDTKTL NLTITPSATS TPETITACDS YTWSANGTTY TTSGTYTAVV GCDTKTLNLT INPSTSSATE TVSRCDSYTW PVNGTTYTAT GNYTHTIGCD TKTLALTITN STSSTQAETA CDSYTWPVNG TTYTASGNYT YSLGCDTKTL ALTITNSTSS TQTETACDSY TWPVNGTTYT ASGNYSYSLG CDTKTLALTI TNSTSSTQTE TACDSYTWPV NGTTYTASGN YSYSSGCDTK TLALTITNST SSTQTETACD SYTWPVNGTT YTASGNYSYS LGCDIKTLAL TINNSSAIQK TVALNSGILT SDHSGAIYQW YKCPNTLLAN ETSQSFTPSS VGDYKVEITV AGCTIVSDCI TVSTLGLYDF KAADFKMYPV PSKGILNILT RYDGNYSIID AAGKIVKSIN LNADSLNTIH LENLSDGVFL IKKTDGNSFK AQKFILKK
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