| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2668 |
|---|
| Symbol | |
|---|
| ID | 5090243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 3174588 |
|---|
| End bp | 3179819 |
|---|
| Gene Length | 5232 bp |
|---|
| Protein Length | 1743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644742092 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001195010 |
|---|
| Protein GI | 146300419 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GAATATTTAT ATTACTATTT CAAATAACTG CTTTTTTCAG TTATTCTCAG
GATACAATAA TAAAGTCTGT AAAATCTAAT TTAAAAATTC AGGCTGTTGT TGATCCAGGA
GGCGGGGATC CCACAGGATA TCCTTGGTTT AGAGATGCAG ATGGAGACGG GTACGGAAAT
CCTGATGTAT CTGTTATAAA AAATACTAAA CCTAGCGGTT ACGTTTCTAA TAAGACAGAT
CTCGATGATG GGAATAAATA CATTACAAAT ATACCTCCTC ATACTGTTTA TCAGGATAAA
GATGGGGATG GGTTTGGAAA CTCAAGTGTA ATTTCATATG CGAGTACCAG TCGCCCCGGA
TATGTTGACC AAGATGGTGA TTGTAATGAT AACGACGCTT CTATAAACCC GAACAATGTG
TGGTATAGAG ATGCGGACGG CGATGGTTAT GGCTGGAGTT CTTCTTCAAT GAAAAGCTGC
CTGCAGCCTT CAGGTTATGT TAAAAACGCC TCTGATTATG ATGATTCGAC AGGTAATATC
ACCAATATCG CACCGCAGTA TTTTTTTCGT GATGCAGATC TTGATGGTTA TGGAAATCCA
TCTAATTACG TCTATTACAG CAGTATGCCA AATGGATATG TAGCTAATAA TTTGGATTGT
GACGATTTTG AATACTGGAT AAACCCTAAT ACGACTTGGT ATCTTGATGC AGATCGCGAT
GGATATGGGG ATAGCAGACA GGTTATTGTT CAGTGTACAC AGCCGGCAGG CTATATACGT
ACTGCGGGAG ATTATGATGA CTCAAATCGA AATATAACAA ATATACCGCC GCAGATTTTT
TATTATGATG CAGATAAAGA CGGCTTTGGT AATCCGTCCA TAAGTGGATA TTTTAGTGTT
CATCCTAATG ACTGGTCTTT CAATAATCTT GATTGTAATG ATAATGACCC GTCAATAAAC
CCTTTAAATG TTTGGTATTA TGATGGTGAC GGTGATGGCT TTGGCTGGAA TGCTTTAAAA
ATTCAGAGCT GTACTCCAGT AGCAGGTTAT GTAAGAAATA ATTCAGATTA CGATGATACG
AATGCAGAGG TTACTGACCG CGCGCCGCAA TACTATTATC AAGATAAAGA TCGCGATGGT
TATGGGGATC CATATGCGAG TGTGTATCGC AGTTATGCTC CTTCTAATTG GGTTTCCAAT
GGAAATGATT GCAATGATAA CGACGCATCT ATAAACCCCA AGACAAGATG GTATCTTGAT
CAGGATGGAG ATGGTTATGG AGAGCTCTAC ACTGGCGGCG TATTAAGTTG TTTACAACCT
GCAGGGTATG TTAATAATGT CTTAGATTAC GATGATTCAA CAGTAAATAT TACCAATATA
GCTCCCCAGT ATTTTTATCA GGATGCTGAT GGAGACGGGT ATGGAAATAA AAATAAAAGT
GTTTATTACA GCGTGCCGCC TGCAGGCTAT GTGGCTAACA GTGCAGATTA CAGCGACACA
GATATTTATA TAACTAATAT TGCACCTCAC ACCGTTTATA AAGATGGTGA CGGAGATGGT
TTTGGATACG CATTGAACAT GTCTGCAGCA AGTGTTTCCA GACCGGGATA TGTAGATAAT
AATACTGACT GCAACGATAA CGATGCCTCA ATTAATCCTA ACACAATATG GTATTTAGAT
GATGATTTAG ATGGTTTAGG AGATCCTGCT AATTTTGTAC AGCAGTGTGG CATTCCAAAT
GGAAACTATG TTTTAAATAA TTTAGACAAC TGTCCTCTTA TTACAGGAAC ATATTCAGAC
TGCTCTGCCG TAACAACACC ATCAACAGAT CAGAATTATA TAATTACCAA AACCTATAAA
CAGCCTTTAA CCGCTATAGT AGATTTTCCT GCAGCAGATC AGGCACAAAG CAGTATTACC
TATTTTGACG GACTGGGCAG ACCCATACAG CAGATTTCAA ATAAACAATC TTCATCTGGA
AGTGATATTA TTACGCATAT TGATTACGAT GATATTGGAA GGCAAATTCA GGAATATCTG
CCTTATAAAT CACAAGGCAC AACAATGGCA TATGAAGAAA GTGCCAAAGA CAATACGATA
ACTTTCTACA GTAATGATGC TTATGAAAAT ACCACTAATC CATTTTCTCA AAAAATGCTT
GAATCTTCAC CTTTAAACAG AGTTTTAAAA CAGGCGGCAC CTGGAGCTTC ATGGGCTATG
GATAGCGGTC ATGAGATTAA ATTAAGATAT GATACCAATA CAGATGGAGA AGTAAAATTA
TATAAAGCAA ATACCTCGTG GAATGCCGAT TCTGGATTGT ATGAAATTAG TTTTCAGGAT
TCGGGATCGT ATGTTAAAAA CGAATTGTAT AAAAATATAA CCTATGATGA AAATACAGGA
AGCAGTCCTG TTGAATCTTC AGGGTCAACT GTAGAGTTTA AAAATAAAGA AGGACAAGTA
GTTTTAAAAA GAACCTATAA TAATGGAGAA AAACACGATA CCCATTATGT TTATGATATT
TACGGAAATT TAACCTATGT AATTCCTCCA AAAGCAGACG GTGTAATCAA TACAGATATT
TTAAACGATT TATGTTACCA GTACAAATAT GATTACCGCA ATCGTTTAGT TGAGAAAAAA
CTGCCGGGAA AACAGTGGGA GTTTATTGTC TACGATAAAC TTGATAAACC TGTTGCCACA
GGTCCTGCAT TCTCTCCGTT TAAAGACGAC AGTTCAATAG GATGGATGAT TACTAAATAC
GATGCTTTCG GACGTCCTGT TTACACCGGA TGGAGTAATC AGACCTGCAA TTCTGCAGCG
AGAAAAGCAT TTCAGGATAC CAAAAATAAT GAAACAGTAT CATTTGAAAC CAAAGAGGCA
TCAGGCTCTG TTGATGATAT ACAGGTATAT TACAGTAATG CGATTGAACC TAAAAATATT
AAACTTTTAA CGGTTAACTA TTATGACAAT TATGCTTATC CAAACGCACC AGCAGTTCCT
TCTGCAATAG AAGGCGATCC TGTTTTAAGT AATGTAAAAG GTTTGGCGAC AGGAAACTGG
ACCAGAACTT TAACTACGGC TTCAAATAAA GATGGAGAAA TCAGTACAAC CTTATACGAT
CTTAAAGCAC GACCAGTACG CACCTATATG CAAAACCATT TAGGAGGCTA TACTCAAACC
GATGTTAAGC TCGATTTTAC AGGGAAAACT CTTTATAGTA TTTCAAAACA CAAAAGAACC
TCAGGTGCTG CAGAATTAAC TGTAAAGGAA GAATTTGCAT ATTCTCCGCA GGATCGTCTG
CTTACGCACA CGCATCAGAT AAACGGAGGT GCGGTAGAAC TTCTGGCTTC TAATACTTAT
GATGATCTGG GACAGCTGAT AAGTAAAAAA ACAGGAAACA GCACCGGAAA TCCATTGCAG
AAAGTGGATT ATAAATACAA CATTAGAGGC TGGCTCACGG CAATTAATCA AACAGGCAAT
CTGCAGGCAG ATTTAGGTTT AACCGATTTA TTTGCTTTTA AAATTAATTA TGATAAACCA
AGCAGTTCAG ATATAACAAG TTTATATAAC GGAAACATTT CTGAAACAGC ATGGCGTACC
TCAAGTGATT TTTCACTGCG TTCGTATAGA TACGAATATG ATAAACTAAA CAGATTAACC
TCTGCAGTGT ATGCAAAACC CGAAGATGCC ATATCGGTAT CTGGTGCTTA TAATGAAAGT
TTAATGTATG ATAAAAATGG CAATATAAAA TTCTTAGAAA GATTTGGCGG CAGTGATGCG
CCTTCGATAA CTTTTAAGAT TGATGATTTG ACATATTCTT ATCGAAATGA AAACTCAAAC
CAGCTGATGA AAGTTACAGA AAATCCTGCT GGAAATGATA ATCAAGGGTT TAAAGACAAC
AATAAAACCG GCGATGACTT TGATTATGAT GATAATGGAA ATATGATTTT GGACAAGAAT
AAAAATATTA CATTAATAAC TTACAATCAT TTAAATCTTC CTAAAAAGAT TACATTTGGA
ACAGGAAACT CAATTGAGTA TATTTACAAC GCAGCCGGAC AAAAACTTGG TAAAATTATC
AATGAAGGAA CTCTTGCAGT TAAAGCCGAT TATCTAGGCG GCTATCAATA TAAAGATAAC
GTTCTTGAAT TTTTCCCTAC AGCAGAGGGA TATGTTAAAA ACACAAACGG TGCATTATCC
TATGTGTTTC AGTACAAAGA CCATTTAGGC AATATACGTT TGAGTTATAC TAAAAATGCA
CAAAACGGTC TTGAGATTAT TGACGAGACC CATTATTATC CATTTGGATT AAAACATGAG
GGTTATGTTG CGTTGCAAGA AAGTACTAAT AAGTATAAGT ACAATGGAAA AGAGTTGCAG
GACGAGCTGG GTCTTAACAT GTATGCTATG GATGCTCGTA TGTATGACCC TGCAATAGCC
AGATGGAATG TTATAGACCC AGTTACACAT CATGATGCAT CAACATATGG TGCATTTAAT
AATAATCCTG TTTATTGGGT TGACCCAAGT GGTCGAGATG GTGAGCATTA TGATTATGGT
TCAGGTAACT ATGTTAATGG TAATGGAGAT GTAATTACTC AAGAAGAAGC GTTAGCGGCT
TATGGTTTAG ATGGTAATGG CAAGGAAAAG GATAAAAAGA AAAAAGCAAG TTCAACTAAA
TCAGATACAG GCAGAAGAAG AGCTTTAAGA CAGAGAGATG ATAATAGAGG TAGATTAACA
AGTGGTAGTG TTCTTTTTGA TGCTCGAGGT CAGGAGTTGT TAAGCCATTG GTTGAATGGT
TCAGGTAAAA ATCTTGAATT ATCGAATAAA GAATGGGGAG ATTACATGAA AGCAAATGGA
TTATTACCAG AACAAATTGA AGAAGCGGCT ATGAATTATT TGTATGGTTT TAGAGAATAT
ATCAAAAAAG AAGGAAAAAT TGATGTTGAT TTCACATTTC ATGCAGAAAT TGAAAATGGA
TATTTTACTG GTTATGAAAT GTTACATGGT TCTAATAAAA AGGTTGGTGA TACTCAAATG
AAAGGAACTG TTGAATACAA TTCTAAAACC TCTCAATTTG ATTTCAATGT TCAAATAATT
TGGAATGATA AAATCGACCC GAATAAAAAT TATGGAGATG ATATTATGAT GTCAAATCTG
CTTAATGTAT TTTATTCACC GAAAGATTAT AACGTTAAAA TAAAATGGAA TGATAAATTT
AGCTACAAGT AA
|
|---|
| Protein sequence | MKKRIFILLF QITAFFSYSQ DTIIKSVKSN LKIQAVVDPG GGDPTGYPWF RDADGDGYGN
PDVSVIKNTK PSGYVSNKTD LDDGNKYITN IPPHTVYQDK DGDGFGNSSV ISYASTSRPG
YVDQDGDCND NDASINPNNV WYRDADGDGY GWSSSSMKSC LQPSGYVKNA SDYDDSTGNI
TNIAPQYFFR DADLDGYGNP SNYVYYSSMP NGYVANNLDC DDFEYWINPN TTWYLDADRD
GYGDSRQVIV QCTQPAGYIR TAGDYDDSNR NITNIPPQIF YYDADKDGFG NPSISGYFSV
HPNDWSFNNL DCNDNDPSIN PLNVWYYDGD GDGFGWNALK IQSCTPVAGY VRNNSDYDDT
NAEVTDRAPQ YYYQDKDRDG YGDPYASVYR SYAPSNWVSN GNDCNDNDAS INPKTRWYLD
QDGDGYGELY TGGVLSCLQP AGYVNNVLDY DDSTVNITNI APQYFYQDAD GDGYGNKNKS
VYYSVPPAGY VANSADYSDT DIYITNIAPH TVYKDGDGDG FGYALNMSAA SVSRPGYVDN
NTDCNDNDAS INPNTIWYLD DDLDGLGDPA NFVQQCGIPN GNYVLNNLDN CPLITGTYSD
CSAVTTPSTD QNYIITKTYK QPLTAIVDFP AADQAQSSIT YFDGLGRPIQ QISNKQSSSG
SDIITHIDYD DIGRQIQEYL PYKSQGTTMA YEESAKDNTI TFYSNDAYEN TTNPFSQKML
ESSPLNRVLK QAAPGASWAM DSGHEIKLRY DTNTDGEVKL YKANTSWNAD SGLYEISFQD
SGSYVKNELY KNITYDENTG SSPVESSGST VEFKNKEGQV VLKRTYNNGE KHDTHYVYDI
YGNLTYVIPP KADGVINTDI LNDLCYQYKY DYRNRLVEKK LPGKQWEFIV YDKLDKPVAT
GPAFSPFKDD SSIGWMITKY DAFGRPVYTG WSNQTCNSAA RKAFQDTKNN ETVSFETKEA
SGSVDDIQVY YSNAIEPKNI KLLTVNYYDN YAYPNAPAVP SAIEGDPVLS NVKGLATGNW
TRTLTTASNK DGEISTTLYD LKARPVRTYM QNHLGGYTQT DVKLDFTGKT LYSISKHKRT
SGAAELTVKE EFAYSPQDRL LTHTHQINGG AVELLASNTY DDLGQLISKK TGNSTGNPLQ
KVDYKYNIRG WLTAINQTGN LQADLGLTDL FAFKINYDKP SSSDITSLYN GNISETAWRT
SSDFSLRSYR YEYDKLNRLT SAVYAKPEDA ISVSGAYNES LMYDKNGNIK FLERFGGSDA
PSITFKIDDL TYSYRNENSN QLMKVTENPA GNDNQGFKDN NKTGDDFDYD DNGNMILDKN
KNITLITYNH LNLPKKITFG TGNSIEYIYN AAGQKLGKII NEGTLAVKAD YLGGYQYKDN
VLEFFPTAEG YVKNTNGALS YVFQYKDHLG NIRLSYTKNA QNGLEIIDET HYYPFGLKHE
GYVALQESTN KYKYNGKELQ DELGLNMYAM DARMYDPAIA RWNVIDPVTH HDASTYGAFN
NNPVYWVDPS GRDGEHYDYG SGNYVNGNGD VITQEEALAA YGLDGNGKEK DKKKKASSTK
SDTGRRRALR QRDDNRGRLT SGSVLFDARG QELLSHWLNG SGKNLELSNK EWGDYMKANG
LLPEQIEEAA MNYLYGFREY IKKEGKIDVD FTFHAEIENG YFTGYEMLHG SNKKVGDTQM
KGTVEYNSKT SQFDFNVQII WNDKIDPNKN YGDDIMMSNL LNVFYSPKDY NVKIKWNDKF
SYK
|
|---|
| |