| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2655 |
|---|
| Symbol | |
|---|
| ID | 5090231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3155784 |
|---|
| End bp | 3156584 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644742080 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001194998 |
|---|
| Protein GI | 146300407 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACA TAATAGATAA TAATCACTTT ATAAAACATA TAATGGAAAA ATTAACAAAT
TACTTTGGGC AGAATATTAA GGATAAAAAA ATAGTTATAA CTGGGGGAAC AACCGGAATA
GGAAAAGCAA TTGCCGATGT TCTGATTTCT CTTGGCGGGC GGGTACTTAT TTTTGGAAGG
GATCAAAAAG ATTTCGAAAA AGCCGTGGCA GATATAAAAA AGCAGTTTCC GGACAGCGAG
CTTTACGGTA CTCCGGCCGA TGTTACCAAA AAGGAGGATA TTGATAAAAT ACTGGCAATA
GCAGATACTG AGCTAGGTGG AATTGACATC CTTATCAATA ATGCAGCCGT GGCAGCCCCG
GGACTCATAG AGGAAGCTTA TGAGGATTAC AAATATGTTA TCGATACAAA CATTACCGGT
TATCTTGCCT TTGCCCAGGC AGCTGCTGTA CGAATGAAAA AGCAGAAATC AGGACATATC
ATCAATATTG GGTCTATGAG CGCCGAAAGC CACACACCGG AAAGTACTAT TTATGTAGCC
ACAAAAACAG CCATACGTGG ATTCAGCACC TCCCTGCGCA AGGAACTAAA TCCTCTTGGG
ATCAAGGTTT CCCTTATTGA GCCGGGCGCT GTAACAAGCG ACATGCAGAC CGATCCGAAG
AAAGTGCAGC ACGAGAAAGT TGAGAAACTG GAGATGCTGG AAGCTTACGA TATTGCAATG
AGCACTTTGT TTTGTCTCTC GCAGCCAAAA AGATGCGATA TCGTTACGAT GCAGATCCGT
CCGCACCTGC AGATCATTTA A
|
|---|
| Protein sequence | MPDIIDNNHF IKHIMEKLTN YFGQNIKDKK IVITGGTTGI GKAIADVLIS LGGRVLIFGR
DQKDFEKAVA DIKKQFPDSE LYGTPADVTK KEDIDKILAI ADTELGGIDI LINNAAVAAP
GLIEEAYEDY KYVIDTNITG YLAFAQAAAV RMKKQKSGHI INIGSMSAES HTPESTIYVA
TKTAIRGFST SLRKELNPLG IKVSLIEPGA VTSDMQTDPK KVQHEKVEKL EMLEAYDIAM
STLFCLSQPK RCDIVTMQIR PHLQII
|
|---|
| |