Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2637 |
Symbol | |
ID | 5093532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3135092 |
End bp | 3136204 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742065 |
Product | integrase catalytic subunit |
Protein accession | YP_001194983 |
Protein GI | 146300392 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.395181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGAAGT ATAAAATTTA TGACCGTGAT TTCAGAGTGA ATGCTGTCAA ACTGGGACTT GAAACAAATT TTTTTAAAGC GGCAAAACAA CTTGGCGTAC CTACAACGAA TATTTACAGA TGGCGGAATG AACTTAGCAA AGACGGATCA AAAAGCTTTT GCGGCAGAAC TCCTGAACAA AAACGGATTG CAGAACTTAA GCTCGCACTG AGAAGAAAAC TAAAAAAGGT TGAAATTCAA ATTGAAATAT TACAAAGCGC AGGCAGATAT ATCCATCAAG GCAAGCCGCA TATTTTTCAC TTTATTGAAA ATAATCTAGA TAAATATTCA CTTTGGAGAA TGTGTCAAGT TTTAGGTATA ATGCCGGCTA CTTATATTAA CTGGAAAAAC AAAATACTTT CTCCCAGAAA ACGTAAGACA ATTTTATTAG AGAAAGAAAT AACTTCTATA TTCTATGAAT ACAAAGAGAT GTACGGTAAT GCAAAAATTG CAGCAGAATT ACAAAGCCGG GGCATTCAAT TAAAATTGTG CGCAGTATCC TGGTATATGA AAAGACTGGG CCTTGTCAGT AAGCACAGCA CAAAGAACAA GGTCAAATCC GGTATACGAT TTAATGCTCA TAATCCTTGT ATTTTTCCTA ACGTTTTAAA TAGACAGTTT AAAGCCGACA AACCTTCTCT GATCTGGGTA ACGGGCATAG CGAGTCTGGA AACAGCCCAG GGGCTGCTGT ACCTGACAAT TATCATAGAC TTATTCGACA GAAAAATTAT CGGATGGAAT CTAAGCGAAC ATTTGACAAT AAGAGAAACC TCCATGCCTG CCTGGGAAAT GGCTGTTCAA AACCGCGGAA CAAAAAAAGG GCTTATATTT CATTCTGACA GATCATCTCA ATACGCCAAT AAAATTTTCA CTCGTAAATT AAACTCTTAT GAGCATATTA TAAGAAGTAT GGCCCGGGCA GGAAATCATT TAGACAATGC TGTCCCTAGG AGCTTTTTTA TTTCCATTAA ATCGGAACTT GTTAATTTAA ACAGTCTTCC AACAAAAAAG GATATGGAAG ACAAAGTAGC TCACTATATT GAAAATCTCA ATTCAAAAGT CGTAACGTTA TAA
|
Protein sequence | MEKYKIYDRD FRVNAVKLGL ETNFFKAAKQ LGVPTTNIYR WRNELSKDGS KSFCGRTPEQ KRIAELKLAL RRKLKKVEIQ IEILQSAGRY IHQGKPHIFH FIENNLDKYS LWRMCQVLGI MPATYINWKN KILSPRKRKT ILLEKEITSI FYEYKEMYGN AKIAAELQSR GIQLKLCAVS WYMKRLGLVS KHSTKNKVKS GIRFNAHNPC IFPNVLNRQF KADKPSLIWV TGIASLETAQ GLLYLTIIID LFDRKIIGWN LSEHLTIRET SMPAWEMAVQ NRGTKKGLIF HSDRSSQYAN KIFTRKLNSY EHIIRSMARA GNHLDNAVPR SFFISIKSEL VNLNSLPTKK DMEDKVAHYI ENLNSKVVTL
|
| |