| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2627 |
|---|
| Symbol | |
|---|
| ID | 5093522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3122140 |
|---|
| End bp | 3122976 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644742055 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001194973 |
|---|
| Protein GI | 146300382 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.159228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACT TTGCAAAAGA CTTTAGAATA GGCATCATTA TTTTTATAAT AGCCATTACA
ACCATTATTC TGGGAGCAGT AACAGACAAA TTGTTACGTT ATTTTTTGTA CCGAAAACTA
ACTAATAAAG AATATGATGC CACGGGATTT AAGTTCTTAA AACATTTAAT TATAACTGTA
ATTTATATTC TGGGTTTTGC TTTTGCTTTA ATTCAAATTC CAGAATTTAA AATTATCGGG
CATTCGTTTT TAGCGGGAGC AGGAGTTATT TCATTAGTTG CCGGTCTTGC TTCGCAACAG
GCTTTGAGTA ATATTGTGAG CGGTATTTTT TTGGTGATTT TTAAACCTTT TAGAATTAAC
GATAAAATCA CGATCAACAA TTTTGTAGGT ACTGTAGAAG ATATCAACCT AAGGCAGGTC
GTTTTAAAAG ATGCCGAAAA CAATCGAATT ATAATTCCAA ACTCTGTTAT CAGCGCTCAA
ATTATTGTAA ATACCAATAT GCATGACACC AAATGCTGTA AAATAATCGA AATAGGTATT
GGTTACGAAT CTGATGTTGA AAAAGCCCTT GAAATAATGC AAGATGAAAT TGCTAAACAT
CCTCTTTTTA TTGATACCAG AACTGCCGAA AATAAAAAAG CAAAAACATC TTTGGTGACA
GCAAGAGTTG TGGCTCTGGC AGATTCGAGC GTAACTTTAA AAGCATGGGC CTGGGCAAAA
AATTCTACAG ATGGTTTTGT GATGTACTGC GATTTACTGC AAAGTATCAA GAAACGTTTT
GATGAATCAG GAATCGACAT TCCCTATCCA CAGCGGGTTG TAACGCTTAA AAAGTAG
|
|---|
| Protein sequence | MFDFAKDFRI GIIIFIIAIT TIILGAVTDK LLRYFLYRKL TNKEYDATGF KFLKHLIITV
IYILGFAFAL IQIPEFKIIG HSFLAGAGVI SLVAGLASQQ ALSNIVSGIF LVIFKPFRIN
DKITINNFVG TVEDINLRQV VLKDAENNRI IIPNSVISAQ IIVNTNMHDT KCCKIIEIGI
GYESDVEKAL EIMQDEIAKH PLFIDTRTAE NKKAKTSLVT ARVVALADSS VTLKAWAWAK
NSTDGFVMYC DLLQSIKKRF DESGIDIPYP QRVVTLKK
|
|---|
| |