| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2613 |
|---|
| Symbol | |
|---|
| ID | 5093508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 3109573 |
|---|
| End bp | 3110934 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644742041 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001194959 |
|---|
| Protein GI | 146300368 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.102362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA ATCACCATTC CAACAATATA CTTTCGAATT TAGGGATTCA GAGCCTGAAC
GAAATGCAGG AAACTGCTCA GGATGTAATT CTGAACGATA ATAACGTTTT ACTGCTTTCG
CCAACGGGAT CAGGAAAAAC GCTGGCATTT TTGCTTCCGG TTTTAGAATT ATTACAGCCT
GAAATTCTTT CGGTTCAATG TTTAATTTTG GTTCCGTCGC GCGAATTGGG ACTTCAGATT
GAACAGGTTT GGAAGAAAAT GGGAACGCAG TACAAAGTAA ACATTTGTTA CGGCGGACAC
TCTATTGATA CTGAAATCAA AAATTTAAGC AATCCTCCGG CAGTTTTAAT TGGAACGCCT
GGAAGAATTG CCGATCATAT TGACAGAGAA ACTTTTAGAA CTGATAAAAT TCAGACTTTA
ATTTTAGATG AATTTGACAA ATCGCTTCAA TTAGGGTTTC ACGAGCAGAT GTCCTTTATT
ATTGGCAGAT TACCAAAAGT AAATAAACGG GTTTTGGTTT CAGCAACTTC TGATATTGAA
ATTCCAAAAT ATACACGAGT GGTAAACCCA ACGGTTTTGG ATTTTATTCC GGAAGAAGAG
GAGAAAGCAA ATCTTTCGAT GAAAATGATT GTTTCGCCAA GTAAAGATAA ATTAGAAAGC
TTGTTTAATT TAATCTGCTC TTTAAAATCA GAGTCGGCTA TTATTTTTTG TAATCATCGT
GATGCTGCAG AACGCATCAG TGACACTTTG AACGAAAAAG GCATTTATGC TACTTATTAT
CATGGCGGAA TGGATCAGGA CGAACGTGAA CGTGCTTTGA TTCAGTTTAG AAACGGAAGC
ATCAGCTACC TCATTACAAC AGATCTTGCC GCACGCGGAC TGGATATTCC TGAAATGAAA
CATGTTATTC ATTATCATTT ACCTTTAAAA GAAGACGAGT TTACGCATCG TAACGGACGT
ACAGCACGTA TGCAGGCAAC AGGAACGGCT TATATTATTG TTCACGAAAG TGAGAAAAAA
CTAGATTATA TCGATTATGA TATGCAGGTT TTAGACGTTA AAAATATAAC GTCGCTGCCT
AAACCTCCGC AATTTCAAAC TATATACATT AGCGGTGGTA AAAAGACAAA ATTAAATAAG
TTTGATATCG TAGGTTTCTT TTCTCAAAAA GGGAAATTAG AAAAAGACGA TTTAGGACTT
ATCGAAGTAA AAGATTTTGT TTCGTTTGCA GCAGTAAAAT TCGGTAAGGT AAAAGATCTG
CTGAAAGCGG TAAAAGATGA AAAAATGAAG GGTAAAAAAT TTAAAATTGA AGTTGCCCGC
AACGTTATAA AGAAAGAAGA AGATAAAAAT AAGAAATTTT AG
|
|---|
| Protein sequence | MNKNHHSNNI LSNLGIQSLN EMQETAQDVI LNDNNVLLLS PTGSGKTLAF LLPVLELLQP
EILSVQCLIL VPSRELGLQI EQVWKKMGTQ YKVNICYGGH SIDTEIKNLS NPPAVLIGTP
GRIADHIDRE TFRTDKIQTL ILDEFDKSLQ LGFHEQMSFI IGRLPKVNKR VLVSATSDIE
IPKYTRVVNP TVLDFIPEEE EKANLSMKMI VSPSKDKLES LFNLICSLKS ESAIIFCNHR
DAAERISDTL NEKGIYATYY HGGMDQDERE RALIQFRNGS ISYLITTDLA ARGLDIPEMK
HVIHYHLPLK EDEFTHRNGR TARMQATGTA YIIVHESEKK LDYIDYDMQV LDVKNITSLP
KPPQFQTIYI SGGKKTKLNK FDIVGFFSQK GKLEKDDLGL IEVKDFVSFA AVKFGKVKDL
LKAVKDEKMK GKKFKIEVAR NVIKKEEDKN KKF
|
|---|
| |