| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2604 |
|---|
| Symbol | pyrE |
|---|
| ID | 5093499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3098808 |
|---|
| End bp | 3099452 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644742032 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_001194950 |
|---|
| Protein GI | 146300359 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTA ATAAAGATAC TGCCGAAAAA ACAGCTGAAT TGCTTTTGCA AATAAATGCA
ATTAAATTGA ATCCAGAAAA TCCTTTTACA TGGGCTTCTG GATGGAAATC TCCTATTTAT
TGTGATAATA GGTTAATTCT TTCATTTCCC AGCATTAGAA ACTACGTTCG CGACGAGTTT
GCGAAGAACA TCGAAAAACA ATTTGGAAAG CCTGATGTCA TTGCCGGTGT TGCCACTGGA
GCCATTGGAG TTGGGATTTT GGTTGCCGAA AGCCTAGGAC TTCCATTCGT ATACGTACGT
CCGGAACCAA AAAAACACGG AAGACAAAAC CAAGTTGAAG GTTTTTTACA AAAAGGACAA
AATGTTGTCG TGGTTGAAGA TTTAATCAGC ACCGGAAAAA GCAGTTTATT AGCTGTAGAA
GCTTTAAGAA ACGAAGGTGC CAACATTAAA GGAATGGCTG CCGTTTTTAC TTATGGTTTT
GGCGTTGCCG AAGAAAACTT CAAAGAAGCT AATGTTGATT TATTCACATT AAGCAACTAC
GAAAATCTAT TAGATTTAGC CGTTCAAAAA CAATACATCA CAGAAGACCA GCAGTCTACA
TTACAAGAAT GGAGCGTAAG CCCATCGACT TGGGGACAGG AATAA
|
|---|
| Protein sequence | MIFNKDTAEK TAELLLQINA IKLNPENPFT WASGWKSPIY CDNRLILSFP SIRNYVRDEF
AKNIEKQFGK PDVIAGVATG AIGVGILVAE SLGLPFVYVR PEPKKHGRQN QVEGFLQKGQ
NVVVVEDLIS TGKSSLLAVE ALRNEGANIK GMAAVFTYGF GVAEENFKEA NVDLFTLSNY
ENLLDLAVQK QYITEDQQST LQEWSVSPST WGQE
|
|---|
| |