Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2593 |
Symbol | |
ID | 5093488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3089282 |
End bp | 3091114 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742021 |
Product | alpha amylase, catalytic region |
Protein accession | YP_001194939 |
Protein GI | 146300348 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.143238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTTTT CGGCTTGTAA AACAAAAGAT TTAAAAATGA GTGAAGTAAA ACAGGAAAAT TCAAAAGAAC AAAAAGTTGT AGTCTATCAG GTTTTTACCC GTTTGTTTGG AAATAAAAAT AAAACCAATA AACCTTGGGG AACAATTGAG GAAAACGGAG TTGGAAAGTT TAATGATTTT ACAGATAAAG CACTTCACGA AATTAAAGAT TTAGGTGTAA CTCATATTTG GTACACTGGT GTTCCTCATC ACGCTTTGGT TCGGGATTAT ACAGCTTACG GAATCTCAAA TGACGATCCC GAAGTAGTAA AAGGACGTGC AGGTTCGCCT TATGCCGTAA AAGATTATTA CAATGTAAAC CCGGATTTAG CTGTAAATCC TGCAAACCGA CTTCAGGAAT TTGAAGATTT AATTGCACGT ACACACAAAG CAGGACTGAA ATTGCTTATT GATATTGTTC CCAATCATAT TGCGAGAAAA TACGAAGGGA AAAACAATCC TGAAGGTGTA AAAGATTTTG GTGCCGATGA TGATATAACG GTTGAATATA AAAGAGATAA TAATTTCTAT TATATCCCAA ATTCACATTT TGAAATTCCT GAAGGAGATA TTCCATTAAA TGGAGAAAAA AATGCTCTTG TTGATGGTGT TTTTGATGAA AATCCGGCAA AATGGACAGG AAACGGCTCA CGAAAAGTAA AACCGGATCA AAACGATTGG TATGAAACTG TAAAAGTAAA TTACGGTGTT CGCCCTGACG GAACCAAAGA TTTTCCTGAA CTTCCGGCTG GTTTTGATCA AAAATCATAC AAAGAACATT TTGCTTTTTG GCAGGATAAA GATGTTCCGG ATTCGTGGAA AAAGTTTAAA TCGATCGCTT TGTACTGGAC CGCAAAAGGT GTTGATGGTT TTCGTTACGA TATGGCCGAA ATGGTTCCGT ACGAATTTTG GAGTTACATG AACTCGGCAG TCAAAATGAA AAATCCTGAT GCATTTTTAC TGGCAGAAGT TTATAATCCT AATGAATATC GCAATTATAT TCGTTTAGGA AAAATGGATT ATTTATATGA TAAAGTAGAA ACGTACGACA AATTGAAAGA TATCATTCGC GGAAAATCGT CTCCTGACGG ATTATCAGAT ATTCAAAAAG GAATGGAGGA TATCGAACAT CATATGCTTC ATTTTTTAGA CAATCATGAC GAACAGCGTT TGGCTTCGCC GGAATTTGCC GGAACGCCAG AAAGAGGAAA ACCTTTAATG GTTGTTTCGA CAACTTTAAG TACTTCGCCA ACGATGGTGT ATTTTGGGCA GGAAGTAGGA GAGGCCGGAA ATGAAAATGC TGGTTTTGGA ACGCGTTCCA GAACTTCGAT TTTTGATTAT ATTGGAGTAC CAAGTCATCA AAAATGGATG AATGAAGGTA AATTTGACGG CGGACAATTG TCTGATTCTG AAAAAGCTTT GCGTGATTTT TATAAACGAT TATTGAATTT CTCTCTAAAA AGTTCGGCTT TAATGGGAAG TTTTCAGGAA ATCCAATCAG TAAACCGTCA AAATACGGCT GGTTACGATG AATTAATTTA TTCTTATGTT CGCTGGTCTG AAAACCAAAA GTTAATTGTT ACAGCTAATT TCTCTTCAGA AAAAACAAGC GAGTTTGATT TGAAGATTCC TGCCGATGTC ATTTCAAAAT GGAATTTTAA AGATGGAGAA TATCAGCTTA CAGATCAATT GTACAAAACA ACTTCGGTAA AACTAATTGT GAAGAACGGA GAAGGAAGCG CCAGAATAAA AATCCTGCCT TCTGAATCGT TTATTTTTGA ATTAAAAATC TAA
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Protein sequence | MLFSACKTKD LKMSEVKQEN SKEQKVVVYQ VFTRLFGNKN KTNKPWGTIE ENGVGKFNDF TDKALHEIKD LGVTHIWYTG VPHHALVRDY TAYGISNDDP EVVKGRAGSP YAVKDYYNVN PDLAVNPANR LQEFEDLIAR THKAGLKLLI DIVPNHIARK YEGKNNPEGV KDFGADDDIT VEYKRDNNFY YIPNSHFEIP EGDIPLNGEK NALVDGVFDE NPAKWTGNGS RKVKPDQNDW YETVKVNYGV RPDGTKDFPE LPAGFDQKSY KEHFAFWQDK DVPDSWKKFK SIALYWTAKG VDGFRYDMAE MVPYEFWSYM NSAVKMKNPD AFLLAEVYNP NEYRNYIRLG KMDYLYDKVE TYDKLKDIIR GKSSPDGLSD IQKGMEDIEH HMLHFLDNHD EQRLASPEFA GTPERGKPLM VVSTTLSTSP TMVYFGQEVG EAGNENAGFG TRSRTSIFDY IGVPSHQKWM NEGKFDGGQL SDSEKALRDF YKRLLNFSLK SSALMGSFQE IQSVNRQNTA GYDELIYSYV RWSENQKLIV TANFSSEKTS EFDLKIPADV ISKWNFKDGE YQLTDQLYKT TSVKLIVKNG EGSARIKILP SESFIFELKI
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