Gene Fjoh_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2593 
Symbol 
ID5093488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3089282 
End bp3091114 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content36% 
IMG OID644742021 
Productalpha amylase, catalytic region 
Protein accessionYP_001194939 
Protein GI146300348 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.143238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTT CGGCTTGTAA AACAAAAGAT TTAAAAATGA GTGAAGTAAA ACAGGAAAAT 
TCAAAAGAAC AAAAAGTTGT AGTCTATCAG GTTTTTACCC GTTTGTTTGG AAATAAAAAT
AAAACCAATA AACCTTGGGG AACAATTGAG GAAAACGGAG TTGGAAAGTT TAATGATTTT
ACAGATAAAG CACTTCACGA AATTAAAGAT TTAGGTGTAA CTCATATTTG GTACACTGGT
GTTCCTCATC ACGCTTTGGT TCGGGATTAT ACAGCTTACG GAATCTCAAA TGACGATCCC
GAAGTAGTAA AAGGACGTGC AGGTTCGCCT TATGCCGTAA AAGATTATTA CAATGTAAAC
CCGGATTTAG CTGTAAATCC TGCAAACCGA CTTCAGGAAT TTGAAGATTT AATTGCACGT
ACACACAAAG CAGGACTGAA ATTGCTTATT GATATTGTTC CCAATCATAT TGCGAGAAAA
TACGAAGGGA AAAACAATCC TGAAGGTGTA AAAGATTTTG GTGCCGATGA TGATATAACG
GTTGAATATA AAAGAGATAA TAATTTCTAT TATATCCCAA ATTCACATTT TGAAATTCCT
GAAGGAGATA TTCCATTAAA TGGAGAAAAA AATGCTCTTG TTGATGGTGT TTTTGATGAA
AATCCGGCAA AATGGACAGG AAACGGCTCA CGAAAAGTAA AACCGGATCA AAACGATTGG
TATGAAACTG TAAAAGTAAA TTACGGTGTT CGCCCTGACG GAACCAAAGA TTTTCCTGAA
CTTCCGGCTG GTTTTGATCA AAAATCATAC AAAGAACATT TTGCTTTTTG GCAGGATAAA
GATGTTCCGG ATTCGTGGAA AAAGTTTAAA TCGATCGCTT TGTACTGGAC CGCAAAAGGT
GTTGATGGTT TTCGTTACGA TATGGCCGAA ATGGTTCCGT ACGAATTTTG GAGTTACATG
AACTCGGCAG TCAAAATGAA AAATCCTGAT GCATTTTTAC TGGCAGAAGT TTATAATCCT
AATGAATATC GCAATTATAT TCGTTTAGGA AAAATGGATT ATTTATATGA TAAAGTAGAA
ACGTACGACA AATTGAAAGA TATCATTCGC GGAAAATCGT CTCCTGACGG ATTATCAGAT
ATTCAAAAAG GAATGGAGGA TATCGAACAT CATATGCTTC ATTTTTTAGA CAATCATGAC
GAACAGCGTT TGGCTTCGCC GGAATTTGCC GGAACGCCAG AAAGAGGAAA ACCTTTAATG
GTTGTTTCGA CAACTTTAAG TACTTCGCCA ACGATGGTGT ATTTTGGGCA GGAAGTAGGA
GAGGCCGGAA ATGAAAATGC TGGTTTTGGA ACGCGTTCCA GAACTTCGAT TTTTGATTAT
ATTGGAGTAC CAAGTCATCA AAAATGGATG AATGAAGGTA AATTTGACGG CGGACAATTG
TCTGATTCTG AAAAAGCTTT GCGTGATTTT TATAAACGAT TATTGAATTT CTCTCTAAAA
AGTTCGGCTT TAATGGGAAG TTTTCAGGAA ATCCAATCAG TAAACCGTCA AAATACGGCT
GGTTACGATG AATTAATTTA TTCTTATGTT CGCTGGTCTG AAAACCAAAA GTTAATTGTT
ACAGCTAATT TCTCTTCAGA AAAAACAAGC GAGTTTGATT TGAAGATTCC TGCCGATGTC
ATTTCAAAAT GGAATTTTAA AGATGGAGAA TATCAGCTTA CAGATCAATT GTACAAAACA
ACTTCGGTAA AACTAATTGT GAAGAACGGA GAAGGAAGCG CCAGAATAAA AATCCTGCCT
TCTGAATCGT TTATTTTTGA ATTAAAAATC TAA
 
Protein sequence
MLFSACKTKD LKMSEVKQEN SKEQKVVVYQ VFTRLFGNKN KTNKPWGTIE ENGVGKFNDF 
TDKALHEIKD LGVTHIWYTG VPHHALVRDY TAYGISNDDP EVVKGRAGSP YAVKDYYNVN
PDLAVNPANR LQEFEDLIAR THKAGLKLLI DIVPNHIARK YEGKNNPEGV KDFGADDDIT
VEYKRDNNFY YIPNSHFEIP EGDIPLNGEK NALVDGVFDE NPAKWTGNGS RKVKPDQNDW
YETVKVNYGV RPDGTKDFPE LPAGFDQKSY KEHFAFWQDK DVPDSWKKFK SIALYWTAKG
VDGFRYDMAE MVPYEFWSYM NSAVKMKNPD AFLLAEVYNP NEYRNYIRLG KMDYLYDKVE
TYDKLKDIIR GKSSPDGLSD IQKGMEDIEH HMLHFLDNHD EQRLASPEFA GTPERGKPLM
VVSTTLSTSP TMVYFGQEVG EAGNENAGFG TRSRTSIFDY IGVPSHQKWM NEGKFDGGQL
SDSEKALRDF YKRLLNFSLK SSALMGSFQE IQSVNRQNTA GYDELIYSYV RWSENQKLIV
TANFSSEKTS EFDLKIPADV ISKWNFKDGE YQLTDQLYKT TSVKLIVKNG EGSARIKILP
SESFIFELKI