| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2589 |
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| Symbol | |
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| ID | 5093484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3083460 |
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| End bp | 3084209 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644742017 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001194935 |
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| Protein GI | 146300344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.62342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGAG TTTTAAAGAG AAGATTTGGC TTATTGGGCC GTAATATTAG TTACTCATTT
TCAAAAGGTT ATTTTACAGA AAAATTCAAC GATGAAATTT TCGCAGGCAA CAGCTACGAA
AACTTCGATA TTTCTGAAAT CAGCCATTTT ACCGGATTAT TAAAAAACAA TCCTGATTTG
AAAGGTTTAA ATGTTACAAT TCCATACAAA GAGCAAATTA TTCCTTTTCT GGATAAACTT
TCAAAAAAAG CGGCTTTAAT TGGTGCTGTA AATACTATTA AATTTACCAA AAACGGAAAA
TTAAAAGGCT ACAACACCGA TTATTACGGT TTTAAAAAAT CATTAAAACC ATTACTGGAG
CCTCACCATA AAAAAGCTTT GATTTTAGGA ACCGGAGGCG CTTCAAAAGG TGTTGCTTTT
GCACTTGATG AACTTGATAT TCCATATACT TTTGTTTCGA GAGAAGCCAA AGAAAATATT
ATCGATTATA ATTTAATCAA CGCAACGACT TTTGATAATT TTCAAATTAT CATTAACTGC
ACTCCTGTTG GCACAAGTCC TAACGTAGAA GCCTATCCGG ATCTGCCTTA TGAGTTTTTT
ACAGAAAAAC ATATTGCTTA CGATTTGATT TACAATCCTG CAGAAACTCA ATTTCTAAAA
AATGCAAAAG AAAGAGGCGC AGTAATCAAA AACGGATACG ATATGCTTAT TTTTCAGGCA
GAGAAAGCCT GGAAGATCTG GAACAAATAA
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| Protein sequence | MIGVLKRRFG LLGRNISYSF SKGYFTEKFN DEIFAGNSYE NFDISEISHF TGLLKNNPDL
KGLNVTIPYK EQIIPFLDKL SKKAALIGAV NTIKFTKNGK LKGYNTDYYG FKKSLKPLLE
PHHKKALILG TGGASKGVAF ALDELDIPYT FVSREAKENI IDYNLINATT FDNFQIIINC
TPVGTSPNVE AYPDLPYEFF TEKHIAYDLI YNPAETQFLK NAKERGAVIK NGYDMLIFQA
EKAWKIWNK
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