Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2524 |
Symbol | dapD |
ID | 5091978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3008393 |
End bp | 3009208 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644741952 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_001194870 |
Protein GI | 146300279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.183762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTT TACAGACTAC AATTGAACAA GCTTGGGAAA ACAGAGCTTT ATTACAAGAA ACAGCTACAA CTGATGCTAT TAGAGAAGTT ATCGAATTGG TTGATGCAGG AAAATTACGT GTTGCTGAAC CAGTTGGTGA TAAATGGCAG GTAAACGAAT GGGTTAAGAA AGCGGTTGTA ATGTATTTCC CAATTCAAAA AATGGAAACA TGGGAATCTG GTATTTTTGA ATACCACGAT AAAATGCTCC TTAAAAGAAA TTATGCTGAG AAAGGAATTC GTGTAGTACC AAATGCTGTT GCACGTTATG GAGCTTATAT TTCAAGCGGT GTTATTTTAA TGCCTAGTTA TGTAAACATT GGTGCTTATG TTGATGAGGG AACTATGGTT GATACATGGG CAACTGTTGG AAGCTGTGCA CAAATTGGTA AAAACGTACA CTTAAGCGGT GGTGTTGGAA TTGGCGGTGT TTTAGAGCCA TTACAAGCTG CTCCGGTAAT TATTGAAGAC GGTGCTTTTA TTGGTTCTCG TTGTATTGTT GTAGAAGGTG TTCACGTTGG TAAAGAAGCT GTTCTTGGTG CTAACGTTTG TTTAACTGCT TCAACAAAAA TTATTGATGT TACGGGTGAC GAACCAGTTG AAATGAAAGG TTTTGTTCCT GCACGTTCTG TTGTAATTCC AGGAAGTTAC ACTAAGAAAT TTGCTGCTGG TGAATTCCAA GTTCCATGCG CTTTAATCAT TGGAACTCGT AAACCTTCTA CAGATTTAAA AACTTCATTA AATAATGCAC TTCGCGAATA CGATGTTGCA GTATAG
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Protein sequence | MNSLQTTIEQ AWENRALLQE TATTDAIREV IELVDAGKLR VAEPVGDKWQ VNEWVKKAVV MYFPIQKMET WESGIFEYHD KMLLKRNYAE KGIRVVPNAV ARYGAYISSG VILMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQAAPVIIED GAFIGSRCIV VEGVHVGKEA VLGANVCLTA STKIIDVTGD EPVEMKGFVP ARSVVIPGSY TKKFAAGEFQ VPCALIIGTR KPSTDLKTSL NNALREYDVA V
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