Gene Fjoh_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2506 
Symbol 
ID5091960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp2993093 
End bp2993794 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content31% 
IMG OID644741934 
Producthypothetical protein 
Protein accessionYP_001194852 
Protein GI146300261 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.56137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA ATTCAACTTT TAAAAGTGCG ATTTCTAGTA TTTCTTTTCC CGAAAGCGAG 
AAAATTTACG GTAAATCGAT TCATGATCCA ATTTTAAGCC TTATTGTAAA AGATCATCCT 
TCTTTTTGTG ATGATGATTC TATTTCGGTT CAGGAATTAA ATGAATACCG TCAAAAGTAT 
ATTTCGAATT ATTTGTCTAC TGAGATAGGA ATGCTTTCTG ATCTTGAGAA AAATGTTATT 
TCGTCATTAA AAGAAGACAA ATCGATTGTA AGCATTGTTG AAGATGAAGA TGAAACGAGA 
AGTTTTGGTC AAAAAATAGC CGATAAAGTG GCAGATTTTG GCGGAAGCTG GACGTTTATA 
ATTTCTTTTG TTGTTTTTAT TGTCATTTGG ATTGGCTCAA ATGTTTATAT TTTGGTTAAC 
AAAGGTTTTG ATCCGTATCC GTTTATTTTA TTGAATTTAA TTTTATCATG TATTGCGGCA 
CTTCAGGCTC CGGTAATCAT GATGAGCCAA AACCGTCAGG AAGAAAAAGA CCGAAACCGC 
GCTAAAAAAG ATTACATGAT TAATCTGAAA TCTGAATTAG AAATTAGAAT GATTCACGAT 
AAAATTGATC ATCTTATTAT GCATCAGCAG CAAGAATTAA TTGAAATTCA AAAAGTGCAG 
ATCGAAATGA TGAATGATAT TTTGAACCAG GTTAAGAAGT AA
 
Protein sequence
MKNNSTFKSA ISSISFPESE KIYGKSIHDP ILSLIVKDHP SFCDDDSISV QELNEYRQKY 
ISNYLSTEIG MLSDLEKNVI SSLKEDKSIV SIVEDEDETR SFGQKIADKV ADFGGSWTFI 
ISFVVFIVIW IGSNVYILVN KGFDPYPFIL LNLILSCIAA LQAPVIMMSQ NRQEEKDRNR 
AKKDYMINLK SELEIRMIHD KIDHLIMHQQ QELIEIQKVQ IEMMNDILNQ VKK