| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2484 |
|---|
| Symbol | |
|---|
| ID | 5091938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2973703 |
|---|
| End bp | 2974341 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 644741912 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001194830 |
|---|
| Protein GI | 146300239 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0231094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATT TAGCTCATCA AATTGAAACA TTGAATATCG AACTTTTAAA ACAGGTTCCA
CAAGAAATAC TGGGAGCTTT CCAAAAATCA ATTCAAGATT TGAAAAGTCT GAATATAGAA
ATTAATAGTT TAAAAGTTGG AGATAAAATT CCAGATTTTT CTTTAAAAAA TGCAGTAAAT
GATACCATTA CATCTGACTG TATTTTAAGG AATGGAAAAA TGATAATCGC GTTTTACAGA
GGAAGCTGGT GTCCTTATTG CAATTTGGAG TTAAGAACAT TACAAGAAAA TCTTTTGAGA
ATTACGGCAA AAAATACGAC TTTAGTCGCA ATCTCACCGC AGAGTTCAGA TAATAGTTTA
ACACTTAAAG AAAAACACAA TTTACAGTTT GAAGTGCTTA CAGATTTACA TAATGCTTAT
GCAAAACAGT TAGGGATTAC TTTTCAGCTG CAGGATTTTG TCATACCGCA TTATCAAACT
CTTGGTATTA ATCTTGAAGA TTTTAATAAA GATCAAGAGA ATACATTGCC GGTTCCTGCT
GTTTTTGCAG TAAACGAAAA CGGAATTATA ATTTATAAAT TCCTAGATGT AAATTATATG
AATAGGATTG ATATTGAAGA ATTAATTAAC GTATTATGA
|
|---|
| Protein sequence | MNDLAHQIET LNIELLKQVP QEILGAFQKS IQDLKSLNIE INSLKVGDKI PDFSLKNAVN
DTITSDCILR NGKMIIAFYR GSWCPYCNLE LRTLQENLLR ITAKNTTLVA ISPQSSDNSL
TLKEKHNLQF EVLTDLHNAY AKQLGITFQL QDFVIPHYQT LGINLEDFNK DQENTLPVPA
VFAVNENGII IYKFLDVNYM NRIDIEELIN VL
|
|---|
| |