Gene Fjoh_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2479 
Symbol 
ID5091933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2969529 
End bp2970158 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content33% 
IMG OID644741907 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_001194825 
Protein GI146300234 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.114272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTAT TCAGTTTTTG GAAAAAAGAA GAAAATCTCT TCGATGAAAG TATTACTATA 
GAAGAAACCA GGTTTGTGGT TTTAGATACC GAAACTACTG GTTTTGATTA TGAAAACGAC
CGAATTTTAT GCATCGGCGC TTTGGCATTA CAAAACGGCG TAATTTCGGT TCAGGATAGT
TTTGAAATAT ATTTACATCA GGATCATTAT GATAAATCGA CAGCGCAGAT TCACGGAATT
TTAAAAGATC TGCTTGTTAA ACGTCCAACA GAACTAGAAG CTTTACAGCA GTTTTTAGAT
TTTTTAGGCG ATTCAATAAT CATCGCACAT CATACTGTTT TTGATGTTAC TATGATTAAT
AAAGCTCTCG AAAGAAACGG ACTGCCTCAA CTCACAAATA AAACTTTAGA TACAGCTTAT
TTATACAAGA AAACCTTGAT TCAGTCGCAT TTATTTGAGC GAAAAGATCA TTATACTTTA
GATGATCTGG CAGATAAATT CGATATTTCT AAAAAAGACA GACACACTGC TCTAGGAGAT
GCTTATATAA CTGCTATTGC TTTTCTTAAA ATTGTAAAGA AATTGCGGGA GAAAAAGGCA
GTTTCATTAA ATCAGCTTTT TAAAAATTAA
 
Protein sequence
MGLFSFWKKE ENLFDESITI EETRFVVLDT ETTGFDYEND RILCIGALAL QNGVISVQDS 
FEIYLHQDHY DKSTAQIHGI LKDLLVKRPT ELEALQQFLD FLGDSIIIAH HTVFDVTMIN
KALERNGLPQ LTNKTLDTAY LYKKTLIQSH LFERKDHYTL DDLADKFDIS KKDRHTALGD
AYITAIAFLK IVKKLREKKA VSLNQLFKN