Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2479 |
Symbol | |
ID | 5091933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2969529 |
End bp | 2970158 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644741907 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_001194825 |
Protein GI | 146300234 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.114272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTAT TCAGTTTTTG GAAAAAAGAA GAAAATCTCT TCGATGAAAG TATTACTATA GAAGAAACCA GGTTTGTGGT TTTAGATACC GAAACTACTG GTTTTGATTA TGAAAACGAC CGAATTTTAT GCATCGGCGC TTTGGCATTA CAAAACGGCG TAATTTCGGT TCAGGATAGT TTTGAAATAT ATTTACATCA GGATCATTAT GATAAATCGA CAGCGCAGAT TCACGGAATT TTAAAAGATC TGCTTGTTAA ACGTCCAACA GAACTAGAAG CTTTACAGCA GTTTTTAGAT TTTTTAGGCG ATTCAATAAT CATCGCACAT CATACTGTTT TTGATGTTAC TATGATTAAT AAAGCTCTCG AAAGAAACGG ACTGCCTCAA CTCACAAATA AAACTTTAGA TACAGCTTAT TTATACAAGA AAACCTTGAT TCAGTCGCAT TTATTTGAGC GAAAAGATCA TTATACTTTA GATGATCTGG CAGATAAATT CGATATTTCT AAAAAAGACA GACACACTGC TCTAGGAGAT GCTTATATAA CTGCTATTGC TTTTCTTAAA ATTGTAAAGA AATTGCGGGA GAAAAAGGCA GTTTCATTAA ATCAGCTTTT TAAAAATTAA
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Protein sequence | MGLFSFWKKE ENLFDESITI EETRFVVLDT ETTGFDYEND RILCIGALAL QNGVISVQDS FEIYLHQDHY DKSTAQIHGI LKDLLVKRPT ELEALQQFLD FLGDSIIIAH HTVFDVTMIN KALERNGLPQ LTNKTLDTAY LYKKTLIQSH LFERKDHYTL DDLADKFDIS KKDRHTALGD AYITAIAFLK IVKKLREKKA VSLNQLFKN
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